Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
LINC00575Q6W349 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC12.2□□□□□ -0.46
LINC00575Q6W349 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LINC00575Q6W349 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00575Q6W349 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00575Q6W349 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00575Q6W349 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC00575Q6W349 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00575Q6W349 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00575Q6W349 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00575Q6W349 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00575Q6W349 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00575Q6W349 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
LINC00575Q6W349 IRX1P1-201ENST00000438849 1838 ntBASIC12.19□□□□□ -0.46
LINC00575Q6W349 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00575Q6W349 AC067852.2-201ENST00000590513 2313 ntBASIC12.19□□□□□ -0.46
LINC00575Q6W349 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00575Q6W349 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00575Q6W349 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00575Q6W349 VMO1-204ENST00000441199 741 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00575Q6W349 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC12.19□□□□□ -0.46
LINC00575Q6W349 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00575Q6W349 AL136162.1-201ENST00000607711 1078 ntBASIC12.19□□□□□ -0.46
LINC00575Q6W349 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LINC00575Q6W349 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC12.19□□□□□ -0.46
LINC00575Q6W349 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LINC00575Q6W349 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00575Q6W349 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00575Q6W349 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC12.19□□□□□ -0.46
LINC00575Q6W349 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00575Q6W349 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00575Q6W349 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00575Q6W349 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LINC00575Q6W349 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LINC00575Q6W349 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00575Q6W349 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00575Q6W349 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00575Q6W349 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00575Q6W349 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00575Q6W349 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00575Q6W349 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00575Q6W349 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00575Q6W349 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00575Q6W349 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00575Q6W349 AC131281.2-201ENST00000520478 145 ntBASIC12.18□□□□□ -0.46
LINC00575Q6W349 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 AL354811.1-201ENST00000610286 706 ntBASIC12.18□□□□□ -0.46
LINC00575Q6W349 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00575Q6W349 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00575Q6W349 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00575Q6W349 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.18□□□□□ -0.46
LINC00575Q6W349 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00575Q6W349 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00575Q6W349 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00575Q6W349 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
LINC00575Q6W349 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LINC00575Q6W349 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00575Q6W349 AC135279.3-201ENST00000610945 1311 ntBASIC12.17□□□□□ -0.46
LINC00575Q6W349 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00575Q6W349 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00575Q6W349 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC00575Q6W349 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC00575Q6W349 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
LINC00575Q6W349 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00575Q6W349 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00575Q6W349 CYP21A1P-202ENST00000354927 1481 ntBASIC12.17□□□□□ -0.46
LINC00575Q6W349 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00575Q6W349 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00575Q6W349 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00575Q6W349 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00575Q6W349 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00575Q6W349 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00575Q6W349 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
LINC00575Q6W349 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00575Q6W349 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LINC00575Q6W349 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LINC00575Q6W349 MTURN-203ENST00000409688 843 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00575Q6W349 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00575Q6W349 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC12.17□□□□□ -0.46
LINC00575Q6W349 SLC7A5P1-201ENST00000568957 537 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms