Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 KRASP1-201ENST00000407852 552 ntBASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 C1QL1P1-201ENST00000568105 661 ntBASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.27■□□□□ 0.36
NHLRC1Q6VVB1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
NHLRC1Q6VVB1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NHLRC1Q6VVB1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.27■□□□□ 0.35
NHLRC1Q6VVB1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NHLRC1Q6VVB1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 KRT16P5-201ENST00000455284 522 ntBASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 SDHAP1-207ENST00000440850 2000 ntBASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.26■□□□□ 0.35
NHLRC1Q6VVB1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 AC110285.5-201ENST00000611501 352 ntBASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 ITM2C-210ENST00000620962 501 ntBASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 HLA-A-209ENST00000638375 975 ntBASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NHLRC1Q6VVB1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NHLRC1Q6VVB1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms