Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF43Q68DV7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
RNF43Q68DV7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF43Q68DV7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF43Q68DV7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF43Q68DV7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RNF43Q68DV7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF43Q68DV7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF43Q68DV7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF43Q68DV7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF43Q68DV7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF43Q68DV7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RNF43Q68DV7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.15■□□□□ 0.82
RNF43Q68DV7 KSR1P1-201ENST00000446298 240 ntBASIC20.15■□□□□ 0.82
RNF43Q68DV7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF43Q68DV7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.15■□□□□ 0.82
RNF43Q68DV7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.15■□□□□ 0.82
RNF43Q68DV7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF43Q68DV7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF43Q68DV7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF43Q68DV7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF43Q68DV7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF43Q68DV7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF43Q68DV7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF43Q68DV7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RNF43Q68DV7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RNF43Q68DV7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF43Q68DV7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF43Q68DV7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF43Q68DV7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF43Q68DV7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF43Q68DV7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF43Q68DV7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF43Q68DV7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF43Q68DV7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF43Q68DV7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF43Q68DV7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF43Q68DV7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.14■□□□□ 0.81
RNF43Q68DV7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF43Q68DV7 AP003071.4-201ENST00000562276 1284 ntBASIC20.14■□□□□ 0.81
RNF43Q68DV7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF43Q68DV7 AC092865.7-201ENST00000641832 219 ntBASIC20.14■□□□□ 0.81
RNF43Q68DV7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF43Q68DV7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF43Q68DV7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
RNF43Q68DV7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF43Q68DV7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF43Q68DV7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF43Q68DV7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF43Q68DV7 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.13■□□□□ 0.81
RNF43Q68DV7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF43Q68DV7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF43Q68DV7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF43Q68DV7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF43Q68DV7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF43Q68DV7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF43Q68DV7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF43Q68DV7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF43Q68DV7 AL355355.2-201ENST00000442321 338 ntBASIC20.13■□□□□ 0.81
RNF43Q68DV7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.13■□□□□ 0.81
RNF43Q68DV7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF43Q68DV7 AL445675.2-201ENST00000620291 557 ntBASIC20.13■□□□□ 0.81
RNF43Q68DV7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF43Q68DV7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF43Q68DV7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF43Q68DV7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF43Q68DV7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF43Q68DV7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF43Q68DV7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF43Q68DV7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF43Q68DV7 TMEM179-206ENST00000616017 1645 ntBASIC20.13■□□□□ 0.81
RNF43Q68DV7 AC009237.14-201ENST00000609975 1594 ntBASIC20.12■□□□□ 0.81
RNF43Q68DV7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF43Q68DV7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF43Q68DV7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF43Q68DV7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF43Q68DV7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF43Q68DV7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF43Q68DV7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF43Q68DV7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF43Q68DV7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF43Q68DV7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF43Q68DV7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF43Q68DV7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF43Q68DV7 FAM197Y1-201ENST00000421178 764 ntBASIC20.12■□□□□ 0.81
RNF43Q68DV7 AP002982.1-201ENST00000492365 877 ntBASIC20.12■□□□□ 0.81
RNF43Q68DV7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF43Q68DV7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF43Q68DV7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF43Q68DV7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF43Q68DV7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF43Q68DV7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF43Q68DV7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
RNF43Q68DV7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms