Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.31■□□□□ 0.2
C4orf46Q504U0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.31■□□□□ 0.2
C4orf46Q504U0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.31■□□□□ 0.2
C4orf46Q504U0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.31■□□□□ 0.2
C4orf46Q504U0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
C4orf46Q504U0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
C4orf46Q504U0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
C4orf46Q504U0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
C4orf46Q504U0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.31■□□□□ 0.2
C4orf46Q504U0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.31■□□□□ 0.2
C4orf46Q504U0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.31■□□□□ 0.2
C4orf46Q504U0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.31■□□□□ 0.2
C4orf46Q504U0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 TEX21P-204ENST00000641479 1693 ntBASIC16.3■□□□□ 0.2
C4orf46Q504U0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.3■□□□□ 0.2
C4orf46Q504U0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
C4orf46Q504U0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.3■□□□□ 0.2
C4orf46Q504U0 AC010141.2-201ENST00000452426 721 ntBASIC16.3■□□□□ 0.2
C4orf46Q504U0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.3■□□□□ 0.2
C4orf46Q504U0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.3■□□□□ 0.2
C4orf46Q504U0 AC008764.7-201ENST00000593779 1081 ntBASIC16.3■□□□□ 0.2
C4orf46Q504U0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.3■□□□□ 0.2
C4orf46Q504U0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
C4orf46Q504U0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.3■□□□□ 0.2
C4orf46Q504U0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
C4orf46Q504U0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
C4orf46Q504U0 AC093525.10-201ENST00000625130 1569 ntBASIC16.3■□□□□ 0.2
C4orf46Q504U0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.3■□□□□ 0.2
C4orf46Q504U0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf46Q504U0 AC012313.1-201ENST00000593393 3059 ntBASIC16.3■□□□□ 0.2
C4orf46Q504U0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf46Q504U0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf46Q504U0 FP475955.4-201ENST00000623131 1990 ntBASIC16.29■□□□□ 0.2
C4orf46Q504U0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.29■□□□□ 0.2
C4orf46Q504U0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf46Q504U0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.29■□□□□ 0.2
C4orf46Q504U0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf46Q504U0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf46Q504U0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.29■□□□□ 0.2
C4orf46Q504U0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
C4orf46Q504U0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.29■□□□□ 0.2
C4orf46Q504U0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf46Q504U0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf46Q504U0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf46Q504U0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf46Q504U0 MIR572-201ENST00000384983 95 ntBASIC16.29■□□□□ 0.2
C4orf46Q504U0 SLC7A5P2-201ENST00000553010 536 ntBASIC16.29■□□□□ 0.2
C4orf46Q504U0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
C4orf46Q504U0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf46Q504U0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf46Q504U0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf46Q504U0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
C4orf46Q504U0 PKD1P5-201ENST00000532415 10291 ntBASIC16.29■□□□□ 0.2
C4orf46Q504U0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf46Q504U0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.29■□□□□ 0.2
C4orf46Q504U0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
C4orf46Q504U0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf46Q504U0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf46Q504U0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.29■□□□□ 0.2
C4orf46Q504U0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.29■□□□□ 0.2
C4orf46Q504U0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.29■□□□□ 0.2
C4orf46Q504U0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.28■□□□□ 0.2
C4orf46Q504U0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf46Q504U0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.28■□□□□ 0.2
C4orf46Q504U0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf46Q504U0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.28■□□□□ 0.2
C4orf46Q504U0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
C4orf46Q504U0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf46Q504U0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C4orf46Q504U0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms