Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 AC110285.5-201ENST00000611501 352 ntBASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 AP006587.1-201ENST00000534129 1502 ntBASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KHDC1Q4VXA5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 TREX1-205ENST00000625293 1783 ntBASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
KHDC1Q4VXA5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 AC066615.1-201ENST00000640911 628 ntBASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.43■□□□□ 0.7
KHDC1Q4VXA5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 TMEM179-206ENST00000616017 1645 ntBASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KHDC1Q4VXA5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms