Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PCDH1Q08174 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDH1Q08174 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH1Q08174 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDH1Q08174 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH1Q08174 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH1Q08174 MIR4651-201ENST00000582622 73 ntBASIC18.54■□□□□ 0.56
PCDH1Q08174 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PCDH1Q08174 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH1Q08174 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDH1Q08174 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PCDH1Q08174 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PCDH1Q08174 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH1Q08174 AP000974.1-201ENST00000623909 2387 ntBASIC18.54■□□□□ 0.56
PCDH1Q08174 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDH1Q08174 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH1Q08174 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PCDH1Q08174 AC098818.2-201ENST00000564925 2320 ntBASIC18.54■□□□□ 0.56
PCDH1Q08174 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH1Q08174 FP475955.4-201ENST00000623131 1990 ntBASIC18.53■□□□□ 0.56
PCDH1Q08174 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH1Q08174 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH1Q08174 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH1Q08174 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH1Q08174 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH1Q08174 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH1Q08174 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH1Q08174 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH1Q08174 FEM1AP3-201ENST00000403722 1741 ntBASIC18.53■□□□□ 0.56
PCDH1Q08174 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH1Q08174 TSPY21P-201ENST00000433481 731 ntBASIC18.53■□□□□ 0.56
PCDH1Q08174 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PCDH1Q08174 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH1Q08174 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PCDH1Q08174 AL445675.2-201ENST00000620291 557 ntBASIC18.53■□□□□ 0.56
PCDH1Q08174 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
PCDH1Q08174 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH1Q08174 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PCDH1Q08174 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH1Q08174 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH1Q08174 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH1Q08174 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH1Q08174 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH1Q08174 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH1Q08174 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH1Q08174 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH1Q08174 AC087289.5-201ENST00000586076 3175 ntBASIC18.52■□□□□ 0.56
PCDH1Q08174 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH1Q08174 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH1Q08174 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH1Q08174 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH1Q08174 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH1Q08174 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH1Q08174 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDH1Q08174 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PCDH1Q08174 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH1Q08174 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH1Q08174 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDH1Q08174 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCDH1Q08174 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH1Q08174 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDH1Q08174 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH1Q08174 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.52■□□□□ 0.55
PCDH1Q08174 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.52■□□□□ 0.55
PCDH1Q08174 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH1Q08174 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH1Q08174 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH1Q08174 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
PCDH1Q08174 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH1Q08174 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH1Q08174 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
PCDH1Q08174 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH1Q08174 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH1Q08174 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH1Q08174 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH1Q08174 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH1Q08174 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDH1Q08174 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH1Q08174 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH1Q08174 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.51■□□□□ 0.55
PCDH1Q08174 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.51■□□□□ 0.55
PCDH1Q08174 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH1Q08174 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDH1Q08174 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.51■□□□□ 0.55
PCDH1Q08174 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH1Q08174 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH1Q08174 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
PCDH1Q08174 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms