Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 SLC29A4P1-201ENST00000398760 971 ntBASIC14.7□□□□□ -0.06
HIST1H1AQ02539 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H1AQ02539 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 AC093503.3-201ENST00000624917 2352 ntBASIC14.69□□□□□ -0.06
HIST1H1AQ02539 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 AC083906.2-201ENST00000511578 360 ntBASIC14.69□□□□□ -0.06
HIST1H1AQ02539 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 AC018553.1-201ENST00000616682 1458 ntBASIC14.69□□□□□ -0.06
HIST1H1AQ02539 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H1AQ02539 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.68□□□□□ -0.06
HIST1H1AQ02539 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 MIPEPP3-201ENST00000412105 444 ntBASIC14.68□□□□□ -0.06
HIST1H1AQ02539 DUSP5P2-201ENST00000426873 1033 ntBASIC14.68□□□□□ -0.06
HIST1H1AQ02539 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 RAP2CP1-201ENST00000605103 478 ntBASIC14.68□□□□□ -0.06
HIST1H1AQ02539 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.68□□□□□ -0.06
HIST1H1AQ02539 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms