Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A12P48065 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A12P48065 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A12P48065 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A12P48065 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A12P48065 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC6A12P48065 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A12P48065 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A12P48065 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
SLC6A12P48065 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
SLC6A12P48065 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A12P48065 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A12P48065 PRORSD1P-201ENST00000295112 541 ntBASIC18.57■□□□□ 0.56
SLC6A12P48065 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A12P48065 AC004980.1-204ENST00000429707 299 ntBASIC18.57■□□□□ 0.56
SLC6A12P48065 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SLC6A12P48065 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC6A12P48065 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC6A12P48065 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.57■□□□□ 0.56
SLC6A12P48065 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC6A12P48065 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A12P48065 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A12P48065 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A12P48065 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A12P48065 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SLC6A12P48065 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A12P48065 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A12P48065 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SLC6A12P48065 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A12P48065 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC6A12P48065 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A12P48065 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A12P48065 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A12P48065 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC6A12P48065 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A12P48065 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A12P48065 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A12P48065 TSPY23P-201ENST00000440136 739 ntBASIC18.56■□□□□ 0.56
SLC6A12P48065 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A12P48065 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.56■□□□□ 0.56
SLC6A12P48065 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A12P48065 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.56■□□□□ 0.56
SLC6A12P48065 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A12P48065 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.56■□□□□ 0.56
SLC6A12P48065 RARRES2P10-201ENST00000564312 460 ntBASIC18.56■□□□□ 0.56
SLC6A12P48065 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A12P48065 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.56■□□□□ 0.56
SLC6A12P48065 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A12P48065 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A12P48065 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A12P48065 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC6A12P48065 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A12P48065 AC006333.2-201ENST00000607957 2099 ntBASIC18.56■□□□□ 0.56
SLC6A12P48065 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A12P48065 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A12P48065 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.55■□□□□ 0.56
SLC6A12P48065 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A12P48065 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A12P48065 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SLC6A12P48065 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A12P48065 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SLC6A12P48065 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A12P48065 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A12P48065 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SLC6A12P48065 AL353807.1-201ENST00000427475 662 ntBASIC18.55■□□□□ 0.56
SLC6A12P48065 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.55■□□□□ 0.56
SLC6A12P48065 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC6A12P48065 KSR1P1-201ENST00000446298 240 ntBASIC18.55■□□□□ 0.56
SLC6A12P48065 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC6A12P48065 RPS2P4-201ENST00000476944 856 ntBASIC18.55■□□□□ 0.56
SLC6A12P48065 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A12P48065 AP002982.1-201ENST00000492365 877 ntBASIC18.55■□□□□ 0.56
SLC6A12P48065 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC6A12P48065 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SLC6A12P48065 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC6A12P48065 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.55■□□□□ 0.56
SLC6A12P48065 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.55■□□□□ 0.56
SLC6A12P48065 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A12P48065 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.55■□□□□ 0.56
SLC6A12P48065 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A12P48065 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A12P48065 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC6A12P48065 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A12P48065 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A12P48065 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A12P48065 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A12P48065 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SLC6A12P48065 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC6A12P48065 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms