Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF9P41273 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF9P41273 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF9P41273 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.84■□□□□ 0.93
TNFSF9P41273 ECEL1P3-201ENST00000427961 737 ntBASIC20.84■□□□□ 0.93
TNFSF9P41273 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.84■□□□□ 0.93
TNFSF9P41273 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.84■□□□□ 0.93
TNFSF9P41273 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.84■□□□□ 0.93
TNFSF9P41273 AP005242.2-201ENST00000580065 1175 ntBASIC20.84■□□□□ 0.93
TNFSF9P41273 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.84■□□□□ 0.93
TNFSF9P41273 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF9P41273 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TNFSF9P41273 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF9P41273 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF9P41273 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF9P41273 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF9P41273 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TNFSF9P41273 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFSF9P41273 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFSF9P41273 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TNFSF9P41273 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TNFSF9P41273 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFSF9P41273 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFSF9P41273 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFSF9P41273 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TNFSF9P41273 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TNFSF9P41273 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.83■□□□□ 0.93
TNFSF9P41273 TSPY23P-201ENST00000440136 739 ntBASIC20.83■□□□□ 0.93
TNFSF9P41273 AC010947.1-201ENST00000623454 693 ntBASIC20.83■□□□□ 0.93
TNFSF9P41273 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFSF9P41273 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
TNFSF9P41273 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.83■□□□□ 0.92
TNFSF9P41273 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TNFSF9P41273 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TNFSF9P41273 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TNFSF9P41273 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TNFSF9P41273 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF9P41273 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF9P41273 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.82■□□□□ 0.92
TNFSF9P41273 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF9P41273 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF9P41273 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
TNFSF9P41273 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF9P41273 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF9P41273 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF9P41273 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.82■□□□□ 0.92
TNFSF9P41273 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF9P41273 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF9P41273 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.82■□□□□ 0.92
TNFSF9P41273 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.82■□□□□ 0.92
TNFSF9P41273 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.82■□□□□ 0.92
TNFSF9P41273 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TNFSF9P41273 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
TNFSF9P41273 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TNFSF9P41273 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF9P41273 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF9P41273 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF9P41273 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF9P41273 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF9P41273 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TNFSF9P41273 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF9P41273 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.81■□□□□ 0.92
TNFSF9P41273 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF9P41273 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TNFSF9P41273 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF9P41273 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.81■□□□□ 0.92
TNFSF9P41273 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF9P41273 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.81■□□□□ 0.92
TNFSF9P41273 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.81■□□□□ 0.92
TNFSF9P41273 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF9P41273 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
TNFSF9P41273 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF9P41273 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF9P41273 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
TNFSF9P41273 TEX21P-204ENST00000641479 1693 ntBASIC20.8■□□□□ 0.92
TNFSF9P41273 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF9P41273 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF9P41273 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TNFSF9P41273 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.8■□□□□ 0.92
TNFSF9P41273 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF9P41273 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TNFSF9P41273 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF9P41273 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF9P41273 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF9P41273 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TNFSF9P41273 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TNFSF9P41273 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF9P41273 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF9P41273 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF9P41273 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TNFSF9P41273 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.8■□□□□ 0.92
TNFSF9P41273 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF9P41273 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.8■□□□□ 0.92
TNFSF9P41273 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF9P41273 CKBP1-201ENST00000565489 1086 ntBASIC20.8■□□□□ 0.92
TNFSF9P41273 AC012306.2-201ENST00000609350 630 ntBASIC20.8■□□□□ 0.92
TNFSF9P41273 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.8■□□□□ 0.92
TNFSF9P41273 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF9P41273 AC116562.4-201ENST00000641316 2276 ntBASIC20.8■□□□□ 0.92
TNFSF9P41273 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms