Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHAP40939 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHAP40939 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HADHAP40939 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HADHAP40939 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HADHAP40939 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.44■□□□□ 0.7
HADHAP40939 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
HADHAP40939 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
HADHAP40939 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.44■□□□□ 0.7
HADHAP40939 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.44■□□□□ 0.7
HADHAP40939 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.44■□□□□ 0.7
HADHAP40939 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.44■□□□□ 0.7
HADHAP40939 AC124016.1-201ENST00000609552 612 ntBASIC19.44■□□□□ 0.7
HADHAP40939 AC110285.5-201ENST00000611501 352 ntBASIC19.44■□□□□ 0.7
HADHAP40939 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.44■□□□□ 0.7
HADHAP40939 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HADHAP40939 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.44■□□□□ 0.7
HADHAP40939 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
HADHAP40939 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.44■□□□□ 0.7
HADHAP40939 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HADHAP40939 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HADHAP40939 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHAP40939 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHAP40939 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.43■□□□□ 0.7
HADHAP40939 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HADHAP40939 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
HADHAP40939 AC004408.2-201ENST00000623613 2777 ntBASIC19.43■□□□□ 0.7
HADHAP40939 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HADHAP40939 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.43■□□□□ 0.7
HADHAP40939 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HADHAP40939 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHAP40939 KRT18P29-201ENST00000397031 1267 ntBASIC19.43■□□□□ 0.7
HADHAP40939 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.43■□□□□ 0.7
HADHAP40939 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.43■□□□□ 0.7
HADHAP40939 KRT16P5-201ENST00000455284 522 ntBASIC19.43■□□□□ 0.7
HADHAP40939 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.43■□□□□ 0.7
HADHAP40939 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.43■□□□□ 0.7
HADHAP40939 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHAP40939 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHAP40939 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.43■□□□□ 0.7
HADHAP40939 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHAP40939 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHAP40939 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHAP40939 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HADHAP40939 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.43■□□□□ 0.7
HADHAP40939 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HADHAP40939 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.42■□□□□ 0.7
HADHAP40939 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HADHAP40939 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HADHAP40939 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.42■□□□□ 0.7
HADHAP40939 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HADHAP40939 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HADHAP40939 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HADHAP40939 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HADHAP40939 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HADHAP40939 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HADHAP40939 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HADHAP40939 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HADHAP40939 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HADHAP40939 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.42■□□□□ 0.7
HADHAP40939 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.42■□□□□ 0.7
HADHAP40939 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.42■□□□□ 0.7
HADHAP40939 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.42■□□□□ 0.7
HADHAP40939 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HADHAP40939 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.42■□□□□ 0.7
HADHAP40939 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HADHAP40939 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HADHAP40939 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HADHAP40939 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HADHAP40939 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HADHAP40939 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HADHAP40939 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HADHAP40939 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.41■□□□□ 0.7
HADHAP40939 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.41■□□□□ 0.7
HADHAP40939 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HADHAP40939 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HADHAP40939 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.41■□□□□ 0.7
HADHAP40939 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
HADHAP40939 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.41■□□□□ 0.7
HADHAP40939 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
HADHAP40939 C1QBPP2-201ENST00000528754 825 ntBASIC19.41■□□□□ 0.7
HADHAP40939 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
HADHAP40939 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms