Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIK1P39086 AC125437.2-201ENST00000625180 2167 ntBASIC20.28■□□□□ 0.84
GRIK1P39086 AC073130.3-201ENST00000624389 2278 ntBASIC20.28■□□□□ 0.84
GRIK1P39086 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIK1P39086 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GRIK1P39086 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
GRIK1P39086 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GRIK1P39086 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.28■□□□□ 0.84
GRIK1P39086 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.28■□□□□ 0.84
GRIK1P39086 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIK1P39086 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIK1P39086 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.28■□□□□ 0.84
GRIK1P39086 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.28■□□□□ 0.84
GRIK1P39086 EGLN1P1-201ENST00000531623 762 ntBASIC20.28■□□□□ 0.84
GRIK1P39086 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
GRIK1P39086 AC005363.2-201ENST00000618631 242 ntBASIC20.28■□□□□ 0.84
GRIK1P39086 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.28■□□□□ 0.84
GRIK1P39086 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIK1P39086 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.28■□□□□ 0.84
GRIK1P39086 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.28■□□□□ 0.84
GRIK1P39086 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.28■□□□□ 0.84
GRIK1P39086 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.28■□□□□ 0.84
GRIK1P39086 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIK1P39086 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GRIK1P39086 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.27■□□□□ 0.84
GRIK1P39086 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRIK1P39086 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GRIK1P39086 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRIK1P39086 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRIK1P39086 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.27■□□□□ 0.84
GRIK1P39086 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.27■□□□□ 0.84
GRIK1P39086 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
GRIK1P39086 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRIK1P39086 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRIK1P39086 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRIK1P39086 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GRIK1P39086 TREX1-205ENST00000625293 1783 ntBASIC20.27■□□□□ 0.84
GRIK1P39086 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GRIK1P39086 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.27■□□□□ 0.84
GRIK1P39086 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRIK1P39086 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRIK1P39086 TSPY14P-201ENST00000303979 915 ntBASIC20.27■□□□□ 0.84
GRIK1P39086 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.27■□□□□ 0.84
GRIK1P39086 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GRIK1P39086 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.27■□□□□ 0.84
GRIK1P39086 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.27■□□□□ 0.84
GRIK1P39086 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GRIK1P39086 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.27■□□□□ 0.83
GRIK1P39086 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.27■□□□□ 0.83
GRIK1P39086 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GRIK1P39086 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
GRIK1P39086 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GRIK1P39086 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GRIK1P39086 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GRIK1P39086 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GRIK1P39086 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GRIK1P39086 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GRIK1P39086 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.26■□□□□ 0.83
GRIK1P39086 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
GRIK1P39086 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.26■□□□□ 0.83
GRIK1P39086 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.26■□□□□ 0.83
GRIK1P39086 AC128688.1-201ENST00000487626 519 ntBASIC20.26■□□□□ 0.83
GRIK1P39086 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GRIK1P39086 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.26■□□□□ 0.83
GRIK1P39086 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.26■□□□□ 0.83
GRIK1P39086 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GRIK1P39086 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GRIK1P39086 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
GRIK1P39086 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.26■□□□□ 0.83
GRIK1P39086 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GRIK1P39086 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GRIK1P39086 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GRIK1P39086 SDHAP1-207ENST00000440850 2000 ntBASIC20.26■□□□□ 0.83
GRIK1P39086 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GRIK1P39086 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
GRIK1P39086 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GRIK1P39086 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.25■□□□□ 0.83
GRIK1P39086 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GRIK1P39086 RCN1P1-201ENST00000400413 996 ntBASIC20.25■□□□□ 0.83
GRIK1P39086 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.25■□□□□ 0.83
GRIK1P39086 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GRIK1P39086 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.25■□□□□ 0.83
GRIK1P39086 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
GRIK1P39086 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.25■□□□□ 0.83
GRIK1P39086 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GRIK1P39086 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
GRIK1P39086 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
GRIK1P39086 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GRIK1P39086 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GRIK1P39086 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GRIK1P39086 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.25■□□□□ 0.83
GRIK1P39086 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.25■□□□□ 0.83
GRIK1P39086 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GRIK1P39086 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GRIK1P39086 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GRIK1P39086 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.24■□□□□ 0.83
GRIK1P39086 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.24■□□□□ 0.83
GRIK1P39086 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GRIK1P39086 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GRIK1P39086 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms