Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
KRT9P35527 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
KRT9P35527 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.02■□□□□ 0.95
KRT9P35527 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT9P35527 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT9P35527 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
KRT9P35527 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.01■□□□□ 0.95
KRT9P35527 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT9P35527 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT9P35527 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT9P35527 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT9P35527 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.01■□□□□ 0.95
KRT9P35527 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT9P35527 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT9P35527 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT9P35527 AC007613.1-201ENST00000572811 2597 ntBASIC21.01■□□□□ 0.95
KRT9P35527 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT9P35527 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT9P35527 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT9P35527 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT9P35527 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
KRT9P35527 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
KRT9P35527 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT9P35527 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT9P35527 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT9P35527 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KRT9P35527 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT9P35527 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT9P35527 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT9P35527 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
KRT9P35527 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21■□□□□ 0.95
KRT9P35527 APTR-205ENST00000447009 902 ntTSL 2 BASIC21■□□□□ 0.95
KRT9P35527 RPS2P52-201ENST00000469610 820 ntBASIC21■□□□□ 0.95
KRT9P35527 SLC29A4P2-201ENST00000504749 1089 ntBASIC21■□□□□ 0.95
KRT9P35527 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21■□□□□ 0.95
KRT9P35527 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21■□□□□ 0.95
KRT9P35527 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21■□□□□ 0.95
KRT9P35527 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21■□□□□ 0.95
KRT9P35527 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
KRT9P35527 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT9P35527 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT9P35527 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
KRT9P35527 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT9P35527 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21■□□□□ 0.95
KRT9P35527 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT9P35527 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KRT9P35527 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT9P35527 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT9P35527 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT9P35527 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT9P35527 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT9P35527 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KRT9P35527 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT9P35527 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT9P35527 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT9P35527 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT9P35527 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.99■□□□□ 0.95
KRT9P35527 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT9P35527 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT9P35527 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.99■□□□□ 0.95
KRT9P35527 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.99■□□□□ 0.95
KRT9P35527 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT9P35527 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.99■□□□□ 0.95
KRT9P35527 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
KRT9P35527 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
KRT9P35527 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
KRT9P35527 AC009113.1-201ENST00000570267 2443 ntBASIC20.99■□□□□ 0.95
KRT9P35527 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KRT9P35527 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
KRT9P35527 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT9P35527 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
KRT9P35527 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT9P35527 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
KRT9P35527 AC124283.5-201ENST00000624661 1809 ntBASIC20.99■□□□□ 0.95
KRT9P35527 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT9P35527 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
KRT9P35527 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
KRT9P35527 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
KRT9P35527 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
KRT9P35527 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT9P35527 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
KRT9P35527 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT9P35527 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
KRT9P35527 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT9P35527 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT9P35527 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT9P35527 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
KRT9P35527 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT9P35527 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.98■□□□□ 0.95
KRT9P35527 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT9P35527 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.98■□□□□ 0.95
KRT9P35527 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT9P35527 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.98■□□□□ 0.95
KRT9P35527 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.98■□□□□ 0.95
KRT9P35527 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT9P35527 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.98■□□□□ 0.95
KRT9P35527 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.98■□□□□ 0.95
KRT9P35527 SOX15-203ENST00000570788 1093 ntBASIC20.98■□□□□ 0.95
KRT9P35527 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.98■□□□□ 0.95
KRT9P35527 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms