Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CTNNA1P35221 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTNNA1P35221 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNNA1P35221 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.28■□□□□ 0.84
CTNNA1P35221 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.28■□□□□ 0.84
CTNNA1P35221 AC006333.2-201ENST00000607957 2099 ntBASIC20.28■□□□□ 0.84
CTNNA1P35221 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNNA1P35221 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNNA1P35221 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CTNNA1P35221 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.28■□□□□ 0.84
CTNNA1P35221 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CTNNA1P35221 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
CTNNA1P35221 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNNA1P35221 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTNNA1P35221 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CTNNA1P35221 SDHAP1-207ENST00000440850 2000 ntBASIC20.28■□□□□ 0.84
CTNNA1P35221 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNNA1P35221 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CTNNA1P35221 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.28■□□□□ 0.84
CTNNA1P35221 YBX1P10-201ENST00000444752 975 ntBASIC20.28■□□□□ 0.84
CTNNA1P35221 TSPY6P-201ENST00000448518 926 ntBASIC20.28■□□□□ 0.84
CTNNA1P35221 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.28■□□□□ 0.84
CTNNA1P35221 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.28■□□□□ 0.84
CTNNA1P35221 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.28■□□□□ 0.84
CTNNA1P35221 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.28■□□□□ 0.84
CTNNA1P35221 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.28■□□□□ 0.84
CTNNA1P35221 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.28■□□□□ 0.84
CTNNA1P35221 HLA-B-256ENST00000639848 1089 ntBASIC20.28■□□□□ 0.84
CTNNA1P35221 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CTNNA1P35221 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CTNNA1P35221 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.28■□□□□ 0.84
CTNNA1P35221 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.28■□□□□ 0.84
CTNNA1P35221 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNNA1P35221 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.28■□□□□ 0.84
CTNNA1P35221 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.28■□□□□ 0.84
CTNNA1P35221 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTNNA1P35221 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CTNNA1P35221 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNNA1P35221 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNNA1P35221 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.28■□□□□ 0.84
CTNNA1P35221 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNNA1P35221 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CTNNA1P35221 AP006587.1-201ENST00000534129 1502 ntBASIC20.27■□□□□ 0.84
CTNNA1P35221 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTNNA1P35221 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNNA1P35221 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNNA1P35221 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNNA1P35221 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CTNNA1P35221 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CTNNA1P35221 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.27■□□□□ 0.84
CTNNA1P35221 AC092368.3-202ENST00000574180 1591 ntBASIC20.27■□□□□ 0.84
CTNNA1P35221 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNNA1P35221 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNNA1P35221 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNNA1P35221 SLC29A4P1-201ENST00000398760 971 ntBASIC20.27■□□□□ 0.84
CTNNA1P35221 NCF1B-203ENST00000435988 1254 ntBASIC20.27■□□□□ 0.84
CTNNA1P35221 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.27■□□□□ 0.84
CTNNA1P35221 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.27■□□□□ 0.84
CTNNA1P35221 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.27■□□□□ 0.84
CTNNA1P35221 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.27■□□□□ 0.84
CTNNA1P35221 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.27■□□□□ 0.84
CTNNA1P35221 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.27■□□□□ 0.84
CTNNA1P35221 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNNA1P35221 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNNA1P35221 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CTNNA1P35221 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CTNNA1P35221 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.27■□□□□ 0.84
CTNNA1P35221 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTNNA1P35221 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CTNNA1P35221 KRT8P8-201ENST00000434750 1448 ntBASIC20.27■□□□□ 0.83
CTNNA1P35221 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.27■□□□□ 0.83
CTNNA1P35221 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.27■□□□□ 0.83
CTNNA1P35221 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTNNA1P35221 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CTNNA1P35221 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTNNA1P35221 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CTNNA1P35221 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTNNA1P35221 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.26■□□□□ 0.83
CTNNA1P35221 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.26■□□□□ 0.83
CTNNA1P35221 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CTNNA1P35221 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTNNA1P35221 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTNNA1P35221 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CTNNA1P35221 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTNNA1P35221 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTNNA1P35221 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.26■□□□□ 0.83
CTNNA1P35221 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.26■□□□□ 0.83
CTNNA1P35221 MIR4758-201ENST00000577688 71 ntBASIC20.26■□□□□ 0.83
CTNNA1P35221 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.26■□□□□ 0.83
CTNNA1P35221 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.26■□□□□ 0.83
CTNNA1P35221 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTNNA1P35221 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.26■□□□□ 0.83
CTNNA1P35221 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTNNA1P35221 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CTNNA1P35221 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CTNNA1P35221 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTNNA1P35221 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms