Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS2P33552 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CKS2P33552 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CKS2P33552 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.15□□□□□ -0.14
CKS2P33552 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS2P33552 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.15□□□□□ -0.14
CKS2P33552 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CKS2P33552 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CKS2P33552 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.15□□□□□ -0.14
CKS2P33552 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.15□□□□□ -0.14
CKS2P33552 AL031963.3-201ENST00000606441 850 ntBASIC14.15□□□□□ -0.14
CKS2P33552 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.15□□□□□ -0.14
CKS2P33552 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.15□□□□□ -0.14
CKS2P33552 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.15□□□□□ -0.14
CKS2P33552 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.15□□□□□ -0.14
CKS2P33552 AL035685.1-201ENST00000636663 812 ntBASIC14.15□□□□□ -0.14
CKS2P33552 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CKS2P33552 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.15□□□□□ -0.14
CKS2P33552 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CKS2P33552 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.15□□□□□ -0.14
CKS2P33552 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS2P33552 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CKS2P33552 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CKS2P33552 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CKS2P33552 RBM17P2-201ENST00000616397 1405 ntBASIC14.15□□□□□ -0.14
CKS2P33552 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CKS2P33552 AC135279.3-201ENST00000610945 1311 ntBASIC14.15□□□□□ -0.15
CKS2P33552 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
CKS2P33552 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.14□□□□□ -0.15
CKS2P33552 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CKS2P33552 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CKS2P33552 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.14□□□□□ -0.15
CKS2P33552 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CKS2P33552 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.14□□□□□ -0.15
CKS2P33552 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.14□□□□□ -0.15
CKS2P33552 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.14□□□□□ -0.15
CKS2P33552 CCDC92B-201ENST00000575506 885 ntBASIC14.14□□□□□ -0.15
CKS2P33552 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.14□□□□□ -0.15
CKS2P33552 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 AC068880.1-201ENST00000507289 2297 ntBASIC14.14□□□□□ -0.15
CKS2P33552 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
CKS2P33552 PTBP1P-201ENST00000554374 1601 ntBASIC14.14□□□□□ -0.15
CKS2P33552 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.14□□□□□ -0.15
CKS2P33552 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.14□□□□□ -0.15
CKS2P33552 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
CKS2P33552 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
CKS2P33552 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CKS2P33552 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.13□□□□□ -0.15
CKS2P33552 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CKS2P33552 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CKS2P33552 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.13□□□□□ -0.15
CKS2P33552 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 PHGDH-210ENST00000641115 1638 ntBASIC14.13□□□□□ -0.15
CKS2P33552 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.13□□□□□ -0.15
CKS2P33552 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.13□□□□□ -0.15
CKS2P33552 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CKS2P33552 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CKS2P33552 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.13□□□□□ -0.15
CKS2P33552 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.13□□□□□ -0.15
CKS2P33552 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.13□□□□□ -0.15
CKS2P33552 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms