Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP6V0CP27449 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ATP6V0CP27449 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
ATP6V0CP27449 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
ATP6V0CP27449 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
ATP6V0CP27449 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
ATP6V0CP27449 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
ATP6V0CP27449 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.38■□□□□ 0.05
ATP6V0CP27449 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 AC104187.1-201ENST00000607510 612 ntBASIC15.38■□□□□ 0.05
ATP6V0CP27449 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.38■□□□□ 0.05
ATP6V0CP27449 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.38■□□□□ 0.05
ATP6V0CP27449 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ATP6V0CP27449 CYP21A1P-202ENST00000354927 1481 ntBASIC15.38■□□□□ 0.05
ATP6V0CP27449 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.38■□□□□ 0.05
ATP6V0CP27449 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
ATP6V0CP27449 AC135279.3-201ENST00000610945 1311 ntBASIC15.38■□□□□ 0.05
ATP6V0CP27449 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
ATP6V0CP27449 PRORSD1P-202ENST00000563365 2154 ntBASIC15.38■□□□□ 0.05
ATP6V0CP27449 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
ATP6V0CP27449 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6V0CP27449 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.37■□□□□ 0.05
ATP6V0CP27449 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6V0CP27449 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6V0CP27449 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6V0CP27449 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6V0CP27449 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.37■□□□□ 0.05
ATP6V0CP27449 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6V0CP27449 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
ATP6V0CP27449 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6V0CP27449 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6V0CP27449 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.37■□□□□ 0.05
ATP6V0CP27449 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.37■□□□□ 0.05
ATP6V0CP27449 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.37■□□□□ 0.05
ATP6V0CP27449 AL354811.1-201ENST00000610286 706 ntBASIC15.37■□□□□ 0.05
ATP6V0CP27449 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.37■□□□□ 0.05
ATP6V0CP27449 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
ATP6V0CP27449 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6V0CP27449 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6V0CP27449 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.37■□□□□ 0.05
ATP6V0CP27449 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
ATP6V0CP27449 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
ATP6V0CP27449 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.37■□□□□ 0.05
ATP6V0CP27449 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6V0CP27449 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
ATP6V0CP27449 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6V0CP27449 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6V0CP27449 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ATP6V0CP27449 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
ATP6V0CP27449 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6V0CP27449 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6V0CP27449 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6V0CP27449 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6V0CP27449 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6V0CP27449 HLA-G-202ENST00000376815 851 ntBASIC15.36■□□□□ 0.05
ATP6V0CP27449 HLA-G-203ENST00000376818 1127 ntBASIC15.36■□□□□ 0.05
ATP6V0CP27449 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 AL035685.1-201ENST00000636663 812 ntBASIC15.36■□□□□ 0.05
ATP6V0CP27449 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 ANO7L1-203ENST00000602586 1720 ntBASIC15.36■□□□□ 0.05
ATP6V0CP27449 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.36■□□□□ 0.05
ATP6V0CP27449 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6V0CP27449 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6V0CP27449 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6V0CP27449 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6V0CP27449 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ATP6V0CP27449 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms