Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRPH2P23942 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.32■□□□□ 0.52
PRPH2P23942 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRPH2P23942 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.32■□□□□ 0.52
PRPH2P23942 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.32■□□□□ 0.52
PRPH2P23942 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRPH2P23942 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRPH2P23942 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.32■□□□□ 0.52
PRPH2P23942 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.32■□□□□ 0.52
PRPH2P23942 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.32■□□□□ 0.52
PRPH2P23942 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPH2P23942 AC069544.1-201ENST00000609399 999 ntBASIC18.32■□□□□ 0.52
PRPH2P23942 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.32■□□□□ 0.52
PRPH2P23942 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPH2P23942 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.32■□□□□ 0.52
PRPH2P23942 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPH2P23942 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PRPH2P23942 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PRPH2P23942 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRPH2P23942 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRPH2P23942 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRPH2P23942 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PRPH2P23942 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRPH2P23942 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRPH2P23942 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRPH2P23942 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PRPH2P23942 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.31■□□□□ 0.52
PRPH2P23942 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.31■□□□□ 0.52
PRPH2P23942 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.31■□□□□ 0.52
PRPH2P23942 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.31■□□□□ 0.52
PRPH2P23942 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.31■□□□□ 0.52
PRPH2P23942 AC026366.1-201ENST00000488803 879 ntBASIC18.31■□□□□ 0.52
PRPH2P23942 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PRPH2P23942 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRPH2P23942 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.31■□□□□ 0.52
PRPH2P23942 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.31■□□□□ 0.52
PRPH2P23942 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
PRPH2P23942 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRPH2P23942 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.31■□□□□ 0.52
PRPH2P23942 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.31■□□□□ 0.52
PRPH2P23942 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRPH2P23942 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPH2P23942 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.3■□□□□ 0.52
PRPH2P23942 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPH2P23942 AL512353.2-201ENST00000448759 1962 ntBASIC18.3■□□□□ 0.52
PRPH2P23942 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPH2P23942 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PRPH2P23942 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPH2P23942 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
PRPH2P23942 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPH2P23942 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.3■□□□□ 0.52
PRPH2P23942 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRPH2P23942 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.3■□□□□ 0.52
PRPH2P23942 KRT17P3-201ENST00000420566 1262 ntBASIC18.3■□□□□ 0.52
PRPH2P23942 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.3■□□□□ 0.52
PRPH2P23942 AC083906.6-201ENST00000641366 219 ntBASIC18.3■□□□□ 0.52
PRPH2P23942 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPH2P23942 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.3■□□□□ 0.52
PRPH2P23942 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPH2P23942 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPH2P23942 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPH2P23942 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPH2P23942 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PRPH2P23942 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPH2P23942 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRPH2P23942 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRPH2P23942 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRPH2P23942 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.29■□□□□ 0.52
PRPH2P23942 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PRPH2P23942 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.29■□□□□ 0.52
PRPH2P23942 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRPH2P23942 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.29■□□□□ 0.52
PRPH2P23942 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.29■□□□□ 0.52
PRPH2P23942 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRPH2P23942 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.29■□□□□ 0.52
PRPH2P23942 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRPH2P23942 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.29■□□□□ 0.52
PRPH2P23942 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.29■□□□□ 0.52
PRPH2P23942 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRPH2P23942 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRPH2P23942 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.29■□□□□ 0.52
PRPH2P23942 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.29■□□□□ 0.52
PRPH2P23942 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRPH2P23942 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRPH2P23942 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRPH2P23942 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRPH2P23942 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRPH2P23942 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.29■□□□□ 0.52
PRPH2P23942 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRPH2P23942 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRPH2P23942 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRPH2P23942 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRPH2P23942 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRPH2P23942 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRPH2P23942 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.28■□□□□ 0.52
PRPH2P23942 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRPH2P23942 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.28■□□□□ 0.52
PRPH2P23942 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRPH2P23942 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRPH2P23942 TSPY23P-201ENST00000440136 739 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms