Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NCK1P16333 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NCK1P16333 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.17■□□□□ 0.5
NCK1P16333 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.17■□□□□ 0.5
NCK1P16333 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.17■□□□□ 0.5
NCK1P16333 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.17■□□□□ 0.5
NCK1P16333 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NCK1P16333 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.17■□□□□ 0.5
NCK1P16333 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.17■□□□□ 0.5
NCK1P16333 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.17■□□□□ 0.5
NCK1P16333 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.17■□□□□ 0.5
NCK1P16333 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCK1P16333 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.16■□□□□ 0.5
NCK1P16333 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.16■□□□□ 0.5
NCK1P16333 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCK1P16333 AC010980.2-201ENST00000587099 1412 ntBASIC18.16■□□□□ 0.5
NCK1P16333 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.16■□□□□ 0.5
NCK1P16333 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCK1P16333 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.16■□□□□ 0.5
NCK1P16333 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCK1P16333 LTB4R2-202ENST00000528054 3092 ntBASIC18.16■□□□□ 0.5
NCK1P16333 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NCK1P16333 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.16■□□□□ 0.5
NCK1P16333 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.16■□□□□ 0.5
NCK1P16333 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.16■□□□□ 0.5
NCK1P16333 BICD1-207ENST00000551848 1962 ntBASIC18.16■□□□□ 0.5
NCK1P16333 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCK1P16333 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCK1P16333 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCK1P16333 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCK1P16333 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.16■□□□□ 0.5
NCK1P16333 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCK1P16333 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NCK1P16333 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCK1P16333 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCK1P16333 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NCK1P16333 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.16■□□□□ 0.5
NCK1P16333 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCK1P16333 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.15■□□□□ 0.5
NCK1P16333 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
NCK1P16333 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NCK1P16333 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCK1P16333 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCK1P16333 IRX1P1-201ENST00000438849 1838 ntBASIC18.15■□□□□ 0.5
NCK1P16333 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCK1P16333 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCK1P16333 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.15■□□□□ 0.5
NCK1P16333 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCK1P16333 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.15■□□□□ 0.5
NCK1P16333 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCK1P16333 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCK1P16333 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.15■□□□□ 0.5
NCK1P16333 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.15■□□□□ 0.5
NCK1P16333 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.15■□□□□ 0.5
NCK1P16333 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.15■□□□□ 0.5
NCK1P16333 AC008694.1-202ENST00000636953 945 ntBASIC18.15■□□□□ 0.5
NCK1P16333 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCK1P16333 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.15■□□□□ 0.5
NCK1P16333 AL354751.1-201ENST00000412768 1863 ntBASIC18.15■□□□□ 0.5
NCK1P16333 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCK1P16333 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.15■□□□□ 0.5
NCK1P16333 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
NCK1P16333 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCK1P16333 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
NCK1P16333 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCK1P16333 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCK1P16333 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCK1P16333 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.15■□□□□ 0.5
NCK1P16333 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NCK1P16333 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NCK1P16333 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.14■□□□□ 0.5
NCK1P16333 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
NCK1P16333 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
NCK1P16333 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NCK1P16333 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NCK1P16333 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.14■□□□□ 0.49
NCK1P16333 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.14■□□□□ 0.49
NCK1P16333 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.14■□□□□ 0.49
NCK1P16333 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.14■□□□□ 0.49
NCK1P16333 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.14■□□□□ 0.49
NCK1P16333 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.14■□□□□ 0.49
NCK1P16333 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.14■□□□□ 0.49
NCK1P16333 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCK1P16333 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms