Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXB3P14651 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
HOXB3P14651 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXB3P14651 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXB3P14651 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HOXB3P14651 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXB3P14651 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.84■□□□□ 0.61
HOXB3P14651 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXB3P14651 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXB3P14651 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXB3P14651 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXB3P14651 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HOXB3P14651 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXB3P14651 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXB3P14651 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXB3P14651 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXB3P14651 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXB3P14651 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXB3P14651 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXB3P14651 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.84■□□□□ 0.61
HOXB3P14651 LINC02084-201ENST00000606069 1096 ntBASIC18.84■□□□□ 0.61
HOXB3P14651 AC005786.4-201ENST00000623369 682 ntBASIC18.84■□□□□ 0.61
HOXB3P14651 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXB3P14651 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
HOXB3P14651 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXB3P14651 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXB3P14651 AC009237.14-201ENST00000609975 1594 ntBASIC18.84■□□□□ 0.61
HOXB3P14651 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXB3P14651 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXB3P14651 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXB3P14651 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXB3P14651 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HOXB3P14651 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HOXB3P14651 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXB3P14651 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HOXB3P14651 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXB3P14651 PCED1CP-201ENST00000419887 785 ntBASIC18.83■□□□□ 0.6
HOXB3P14651 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXB3P14651 B3GAT3P1-201ENST00000471720 806 ntBASIC18.83■□□□□ 0.6
HOXB3P14651 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
HOXB3P14651 AC128688.1-201ENST00000487626 519 ntBASIC18.83■□□□□ 0.6
HOXB3P14651 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXB3P14651 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXB3P14651 CFTRP2-201ENST00000634304 199 ntBASIC18.83■□□□□ 0.6
HOXB3P14651 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HOXB3P14651 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXB3P14651 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXB3P14651 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXB3P14651 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXB3P14651 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HOXB3P14651 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXB3P14651 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXB3P14651 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXB3P14651 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXB3P14651 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXB3P14651 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXB3P14651 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXB3P14651 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXB3P14651 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXB3P14651 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HOXB3P14651 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXB3P14651 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXB3P14651 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXB3P14651 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXB3P14651 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXB3P14651 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXB3P14651 LINC01238-205ENST00000567549 1107 ntBASIC18.82■□□□□ 0.6
HOXB3P14651 AC026271.3-201ENST00000571884 352 ntBASIC18.82■□□□□ 0.6
HOXB3P14651 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXB3P14651 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXB3P14651 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXB3P14651 AC139530.3-201ENST00000620344 690 ntBASIC18.82■□□□□ 0.6
HOXB3P14651 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXB3P14651 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
HOXB3P14651 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXB3P14651 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXB3P14651 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXB3P14651 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXB3P14651 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXB3P14651 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXB3P14651 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOXB3P14651 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXB3P14651 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXB3P14651 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXB3P14651 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXB3P14651 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOXB3P14651 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXB3P14651 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HOXB3P14651 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXB3P14651 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXB3P14651 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXB3P14651 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.81■□□□□ 0.6
HOXB3P14651 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXB3P14651 AC131212.4-201ENST00000623606 975 ntBASIC18.81■□□□□ 0.6
HOXB3P14651 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXB3P14651 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXB3P14651 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXB3P14651 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXB3P14651 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXB3P14651 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms