Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PEPDP12955 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.78■□□□□ 0.44
PEPDP12955 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEPDP12955 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.78■□□□□ 0.44
PEPDP12955 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PEPDP12955 KRT16P5-201ENST00000455284 522 ntBASIC17.78■□□□□ 0.44
PEPDP12955 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.78■□□□□ 0.44
PEPDP12955 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.78■□□□□ 0.44
PEPDP12955 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.78■□□□□ 0.44
PEPDP12955 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.78■□□□□ 0.44
PEPDP12955 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.78■□□□□ 0.44
PEPDP12955 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.78■□□□□ 0.44
PEPDP12955 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PEPDP12955 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEPDP12955 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.78■□□□□ 0.44
PEPDP12955 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEPDP12955 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.78■□□□□ 0.44
PEPDP12955 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.78■□□□□ 0.44
PEPDP12955 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PEPDP12955 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEPDP12955 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEPDP12955 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.78■□□□□ 0.44
PEPDP12955 AP006587.1-201ENST00000534129 1502 ntBASIC17.77■□□□□ 0.44
PEPDP12955 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PEPDP12955 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PEPDP12955 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PEPDP12955 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PEPDP12955 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.77■□□□□ 0.44
PEPDP12955 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.77■□□□□ 0.44
PEPDP12955 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PEPDP12955 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.77■□□□□ 0.44
PEPDP12955 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PEPDP12955 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.77■□□□□ 0.44
PEPDP12955 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.77■□□□□ 0.44
PEPDP12955 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.77■□□□□ 0.44
PEPDP12955 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.77■□□□□ 0.44
PEPDP12955 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PEPDP12955 AL135905.2-201ENST00000584934 1404 ntBASIC17.77■□□□□ 0.44
PEPDP12955 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PEPDP12955 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.77■□□□□ 0.43
PEPDP12955 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PEPDP12955 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.77■□□□□ 0.43
PEPDP12955 HCG11-201ENST00000411553 5696 ntBASIC17.77■□□□□ 0.43
PEPDP12955 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.77■□□□□ 0.43
PEPDP12955 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PEPDP12955 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
PEPDP12955 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PEPDP12955 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PEPDP12955 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PEPDP12955 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.76■□□□□ 0.43
PEPDP12955 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.76■□□□□ 0.43
PEPDP12955 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 TNXA-203ENST00000507684 2038 ntBASIC17.76■□□□□ 0.43
PEPDP12955 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.76■□□□□ 0.43
PEPDP12955 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.76■□□□□ 0.43
PEPDP12955 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.76■□□□□ 0.43
PEPDP12955 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 RPS2P4-201ENST00000476944 856 ntBASIC17.76■□□□□ 0.43
PEPDP12955 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.76■□□□□ 0.43
PEPDP12955 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PEPDP12955 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PEPDP12955 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PEPDP12955 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PEPDP12955 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.76■□□□□ 0.43
PEPDP12955 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.76■□□□□ 0.43
PEPDP12955 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PEPDP12955 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
PEPDP12955 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.76■□□□□ 0.43
PEPDP12955 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PEPDP12955 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PEPDP12955 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PEPDP12955 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PEPDP12955 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PEPDP12955 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PEPDP12955 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PEPDP12955 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PEPDP12955 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PEPDP12955 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PEPDP12955 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PEPDP12955 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.75■□□□□ 0.43
PEPDP12955 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PEPDP12955 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PEPDP12955 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PEPDP12955 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms