Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH1P12830 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDH1P12830 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH1P12830 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH1P12830 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH1P12830 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH1P12830 KRT16P5-201ENST00000455284 522 ntBASIC18.74■□□□□ 0.59
CDH1P12830 FAM197Y4-202ENST00000622692 608 ntBASIC18.74■□□□□ 0.59
CDH1P12830 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDH1P12830 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH1P12830 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH1P12830 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH1P12830 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH1P12830 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDH1P12830 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH1P12830 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH1P12830 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH1P12830 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CDH1P12830 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH1P12830 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH1P12830 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH1P12830 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH1P12830 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH1P12830 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH1P12830 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH1P12830 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH1P12830 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH1P12830 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH1P12830 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH1P12830 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH1P12830 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH1P12830 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CDH1P12830 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH1P12830 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDH1P12830 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH1P12830 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH1P12830 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH1P12830 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.73■□□□□ 0.59
CDH1P12830 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH1P12830 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.73■□□□□ 0.59
CDH1P12830 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH1P12830 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH1P12830 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.73■□□□□ 0.59
CDH1P12830 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDH1P12830 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH1P12830 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH1P12830 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH1P12830 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH1P12830 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CDH1P12830 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH1P12830 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDH1P12830 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH1P12830 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH1P12830 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDH1P12830 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDH1P12830 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH1P12830 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH1P12830 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH1P12830 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH1P12830 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH1P12830 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CDH1P12830 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH1P12830 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CDH1P12830 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CDH1P12830 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH1P12830 AC142381.4-202ENST00000563973 229 ntBASIC18.72■□□□□ 0.59
CDH1P12830 C1QL1P1-201ENST00000568105 661 ntBASIC18.72■□□□□ 0.59
CDH1P12830 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH1P12830 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH1P12830 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH1P12830 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH1P12830 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH1P12830 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH1P12830 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH1P12830 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH1P12830 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH1P12830 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH1P12830 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH1P12830 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH1P12830 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CDH1P12830 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH1P12830 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CDH1P12830 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH1P12830 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH1P12830 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH1P12830 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH1P12830 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH1P12830 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.71■□□□□ 0.59
CDH1P12830 AL158047.1-201ENST00000445918 881 ntBASIC18.71■□□□□ 0.59
CDH1P12830 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.71■□□□□ 0.59
CDH1P12830 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.71■□□□□ 0.59
CDH1P12830 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.71■□□□□ 0.59
CDH1P12830 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
CDH1P12830 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CDH1P12830 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH1P12830 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH1P12830 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH1P12830 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH1P12830 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH1P12830 ZNF815P-204ENST00000434898 1737 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms