Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40ALP0C0E4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 AL512604.3-201ENST00000569583 964 ntBASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40ALP0C0E4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 AL512408.1-201ENST00000569378 2000 ntBASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 AL353719.1-201ENST00000566847 864 ntBASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 LINC01238-205ENST00000567549 1107 ntBASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 NTF6B-201ENST00000591913 560 ntBASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 AL138966.2-201ENST00000621997 464 ntBASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40ALP0C0E4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 AL691432.2-201ENST00000607222 2038 ntBASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 KRT8P41-201ENST00000533985 1514 ntBASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 AK4P3-201ENST00000418260 669 ntBASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 CKBP1-201ENST00000565489 1086 ntBASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB40ALP0C0E4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RAB40ALP0C0E4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms