Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCL1P09341 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL1P09341 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL1P09341 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCL1P09341 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CXCL1P09341 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL1P09341 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL1P09341 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL1P09341 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.91□□□□□ -0.02
CXCL1P09341 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.91□□□□□ -0.02
CXCL1P09341 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.91□□□□□ -0.02
CXCL1P09341 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCL1P09341 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCL1P09341 AC024257.2-201ENST00000549699 147 ntBASIC14.91□□□□□ -0.02
CXCL1P09341 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CXCL1P09341 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCL1P09341 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCL1P09341 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
CXCL1P09341 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CXCL1P09341 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.91□□□□□ -0.02
CXCL1P09341 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL1P09341 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.91□□□□□ -0.02
CXCL1P09341 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL1P09341 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL1P09341 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CXCL1P09341 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL1P09341 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL1P09341 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CXCL1P09341 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.91□□□□□ -0.02
CXCL1P09341 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL1P09341 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL1P09341 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.91□□□□□ -0.02
CXCL1P09341 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CXCL1P09341 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
CXCL1P09341 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CXCL1P09341 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CXCL1P09341 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 HCG11-201ENST00000411553 5696 ntBASIC14.9□□□□□ -0.02
CXCL1P09341 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCL1P09341 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCL1P09341 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCL1P09341 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCL1P09341 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.9□□□□□ -0.02
CXCL1P09341 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.9□□□□□ -0.02
CXCL1P09341 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 AL136162.1-201ENST00000607711 1078 ntBASIC14.9□□□□□ -0.02
CXCL1P09341 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.9□□□□□ -0.02
CXCL1P09341 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.9□□□□□ -0.02
CXCL1P09341 AC135279.3-201ENST00000610945 1311 ntBASIC14.9□□□□□ -0.02
CXCL1P09341 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CXCL1P09341 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CXCL1P09341 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL1P09341 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CXCL1P09341 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CXCL1P09341 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL1P09341 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL1P09341 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL1P09341 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.89□□□□□ -0.03
CXCL1P09341 AL136116.3-201ENST00000402907 1138 ntBASIC14.89□□□□□ -0.03
CXCL1P09341 AC099791.1-201ENST00000416440 715 ntBASIC14.89□□□□□ -0.03
CXCL1P09341 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL1P09341 AC012414.1-201ENST00000556676 535 ntBASIC14.89□□□□□ -0.03
CXCL1P09341 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.89□□□□□ -0.03
CXCL1P09341 AC138907.5-202ENST00000569484 235 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms