Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.71■□□□□ 0.43
THBS1P07996 AL049812.1-201ENST00000432563 2267 ntBASIC17.71■□□□□ 0.43
THBS1P07996 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS1P07996 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS1P07996 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS1P07996 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
THBS1P07996 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
THBS1P07996 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.71■□□□□ 0.43
THBS1P07996 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.71■□□□□ 0.42
THBS1P07996 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
THBS1P07996 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 IRX1P1-201ENST00000438849 1838 ntBASIC17.7■□□□□ 0.42
THBS1P07996 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.7■□□□□ 0.42
THBS1P07996 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
THBS1P07996 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.7■□□□□ 0.42
THBS1P07996 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.7■□□□□ 0.42
THBS1P07996 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
THBS1P07996 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.7■□□□□ 0.42
THBS1P07996 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
THBS1P07996 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
THBS1P07996 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS1P07996 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
THBS1P07996 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS1P07996 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THBS1P07996 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
THBS1P07996 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS1P07996 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS1P07996 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THBS1P07996 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS1P07996 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
THBS1P07996 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS1P07996 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.69■□□□□ 0.42
THBS1P07996 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.69■□□□□ 0.42
THBS1P07996 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THBS1P07996 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.69■□□□□ 0.42
THBS1P07996 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.69■□□□□ 0.42
THBS1P07996 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
THBS1P07996 FEM1AP3-201ENST00000403722 1741 ntBASIC17.69■□□□□ 0.42
THBS1P07996 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
THBS1P07996 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
THBS1P07996 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
THBS1P07996 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.68■□□□□ 0.42
THBS1P07996 AC006333.2-201ENST00000607957 2099 ntBASIC17.68■□□□□ 0.42
THBS1P07996 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THBS1P07996 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
THBS1P07996 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
THBS1P07996 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
THBS1P07996 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.68■□□□□ 0.42
THBS1P07996 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
THBS1P07996 ESRRAP1-201ENST00000400596 1257 ntBASIC17.68■□□□□ 0.42
THBS1P07996 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.68■□□□□ 0.42
THBS1P07996 TSPY21P-201ENST00000433481 731 ntBASIC17.68■□□□□ 0.42
THBS1P07996 GCSHP5-201ENST00000443090 522 ntBASIC17.68■□□□□ 0.42
THBS1P07996 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.68■□□□□ 0.42
THBS1P07996 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THBS1P07996 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.68■□□□□ 0.42
THBS1P07996 AL160286.2-201ENST00000567150 934 ntBASIC17.68■□□□□ 0.42
THBS1P07996 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.68■□□□□ 0.42
THBS1P07996 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.68■□□□□ 0.42
THBS1P07996 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.68■□□□□ 0.42
THBS1P07996 HLA-A-209ENST00000638375 975 ntBASIC17.68■□□□□ 0.42
THBS1P07996 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
THBS1P07996 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
THBS1P07996 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THBS1P07996 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
THBS1P07996 CROCCP3-202ENST00000420820 1947 ntBASIC17.68■□□□□ 0.42
THBS1P07996 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
THBS1P07996 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.68■□□□□ 0.42
THBS1P07996 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.68■□□□□ 0.42
THBS1P07996 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
THBS1P07996 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.67■□□□□ 0.42
THBS1P07996 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THBS1P07996 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
THBS1P07996 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THBS1P07996 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THBS1P07996 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
THBS1P07996 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THBS1P07996 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
THBS1P07996 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THBS1P07996 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
THBS1P07996 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
THBS1P07996 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
THBS1P07996 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
THBS1P07996 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.67■□□□□ 0.42
THBS1P07996 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.67■□□□□ 0.42
THBS1P07996 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms