Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN1P07384 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CAPN1P07384 RPS2P55-201ENST00000397318 883 ntBASIC18.91■□□□□ 0.62
CAPN1P07384 AC012618.2-201ENST00000428058 849 ntBASIC18.91■□□□□ 0.62
CAPN1P07384 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPN1P07384 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.91■□□□□ 0.62
CAPN1P07384 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN1P07384 AC107956.1-201ENST00000494359 873 ntBASIC18.91■□□□□ 0.62
CAPN1P07384 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.91■□□□□ 0.62
CAPN1P07384 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPN1P07384 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.91■□□□□ 0.62
CAPN1P07384 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.91■□□□□ 0.62
CAPN1P07384 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.91■□□□□ 0.62
CAPN1P07384 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN1P07384 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN1P07384 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN1P07384 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPN1P07384 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN1P07384 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN1P07384 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN1P07384 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.91■□□□□ 0.62
CAPN1P07384 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
CAPN1P07384 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN1P07384 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 AC124283.5-201ENST00000624661 1809 ntBASIC18.9■□□□□ 0.62
CAPN1P07384 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.9■□□□□ 0.62
CAPN1P07384 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.9■□□□□ 0.62
CAPN1P07384 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CAPN1P07384 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.9■□□□□ 0.62
CAPN1P07384 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.9■□□□□ 0.62
CAPN1P07384 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CAPN1P07384 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CAPN1P07384 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CAPN1P07384 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN1P07384 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CAPN1P07384 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CAPN1P07384 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN1P07384 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN1P07384 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN1P07384 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN1P07384 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.89■□□□□ 0.61
CAPN1P07384 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPN1P07384 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPN1P07384 AL121829.2-201ENST00000620908 328 ntBASIC18.89■□□□□ 0.61
CAPN1P07384 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN1P07384 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.89■□□□□ 0.61
CAPN1P07384 AC004408.2-201ENST00000623613 2777 ntBASIC18.89■□□□□ 0.61
CAPN1P07384 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.89■□□□□ 0.61
CAPN1P07384 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CAPN1P07384 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN1P07384 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
CAPN1P07384 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN1P07384 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
CAPN1P07384 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN1P07384 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN1P07384 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN1P07384 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN1P07384 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CAPN1P07384 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CAPN1P07384 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CAPN1P07384 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CAPN1P07384 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN1P07384 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.88■□□□□ 0.61
CAPN1P07384 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN1P07384 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN1P07384 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN1P07384 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.88■□□□□ 0.61
CAPN1P07384 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN1P07384 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN1P07384 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN1P07384 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.88■□□□□ 0.61
CAPN1P07384 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.88■□□□□ 0.61
CAPN1P07384 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CAPN1P07384 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN1P07384 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CAPN1P07384 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN1P07384 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN1P07384 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN1P07384 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN1P07384 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CAPN1P07384 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN1P07384 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN1P07384 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN1P07384 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN1P07384 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms