Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
APOA4P06727 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.27■□□□□ 0.67
APOA4P06727 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APOA4P06727 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.27■□□□□ 0.67
APOA4P06727 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
APOA4P06727 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.27■□□□□ 0.67
APOA4P06727 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOA4P06727 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
APOA4P06727 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOA4P06727 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOA4P06727 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
APOA4P06727 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
APOA4P06727 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.26■□□□□ 0.67
APOA4P06727 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.26■□□□□ 0.67
APOA4P06727 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOA4P06727 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
APOA4P06727 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.26■□□□□ 0.67
APOA4P06727 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.26■□□□□ 0.67
APOA4P06727 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.26■□□□□ 0.67
APOA4P06727 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APOA4P06727 AC073648.6-201ENST00000641589 218 ntBASIC19.26■□□□□ 0.67
APOA4P06727 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APOA4P06727 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOA4P06727 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
APOA4P06727 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
APOA4P06727 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
APOA4P06727 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOA4P06727 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.26■□□□□ 0.67
APOA4P06727 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOA4P06727 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOA4P06727 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
APOA4P06727 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APOA4P06727 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.25■□□□□ 0.67
APOA4P06727 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
APOA4P06727 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOA4P06727 AC141586.3-201ENST00000562166 1838 ntBASIC19.25■□□□□ 0.67
APOA4P06727 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOA4P06727 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
APOA4P06727 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
APOA4P06727 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.25■□□□□ 0.67
APOA4P06727 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOA4P06727 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
APOA4P06727 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APOA4P06727 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOA4P06727 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOA4P06727 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOA4P06727 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOA4P06727 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOA4P06727 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOA4P06727 TSPY20P-201ENST00000450910 630 ntBASIC19.25■□□□□ 0.67
APOA4P06727 AC128676.1-201ENST00000454392 318 ntBASIC19.25■□□□□ 0.67
APOA4P06727 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.25■□□□□ 0.67
APOA4P06727 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.25■□□□□ 0.67
APOA4P06727 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.25■□□□□ 0.67
APOA4P06727 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.25■□□□□ 0.67
APOA4P06727 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOA4P06727 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOA4P06727 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.25■□□□□ 0.67
APOA4P06727 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOA4P06727 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APOA4P06727 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
APOA4P06727 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.25■□□□□ 0.67
APOA4P06727 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.25■□□□□ 0.67
APOA4P06727 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.24■□□□□ 0.67
APOA4P06727 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
APOA4P06727 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.24■□□□□ 0.67
APOA4P06727 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.24■□□□□ 0.67
APOA4P06727 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.24■□□□□ 0.67
APOA4P06727 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.24■□□□□ 0.67
APOA4P06727 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
APOA4P06727 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APOA4P06727 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOA4P06727 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APOA4P06727 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.23■□□□□ 0.67
APOA4P06727 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.23■□□□□ 0.67
APOA4P06727 NBPF21P-201ENST00000425093 1451 ntBASIC19.23■□□□□ 0.67
APOA4P06727 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.23■□□□□ 0.67
APOA4P06727 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
APOA4P06727 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOA4P06727 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOA4P06727 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
APOA4P06727 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APOA4P06727 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms