Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.15■■□□□ 1.3
CHGBP05060 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHGBP05060 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC23.15■■□□□ 1.3
CHGBP05060 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.15■■□□□ 1.3
CHGBP05060 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CHGBP05060 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHGBP05060 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CHGBP05060 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CHGBP05060 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CHGBP05060 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.14■■□□□ 1.3
CHGBP05060 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHGBP05060 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHGBP05060 UNC93B2-201ENST00000285383 730 ntBASIC23.14■■□□□ 1.29
CHGBP05060 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CHGBP05060 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHGBP05060 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.14■■□□□ 1.29
CHGBP05060 TSPY23P-201ENST00000440136 739 ntBASIC23.14■■□□□ 1.29
CHGBP05060 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.14■■□□□ 1.29
CHGBP05060 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.14■■□□□ 1.29
CHGBP05060 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
CHGBP05060 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.14■■□□□ 1.29
CHGBP05060 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHGBP05060 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CHGBP05060 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHGBP05060 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHGBP05060 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 AL049812.1-201ENST00000432563 2267 ntBASIC23.13■■□□□ 1.29
CHGBP05060 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.13■■□□□ 1.29
CHGBP05060 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.13■■□□□ 1.29
CHGBP05060 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.13■■□□□ 1.29
CHGBP05060 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.13■■□□□ 1.29
CHGBP05060 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CHGBP05060 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CHGBP05060 AC211429.1-201ENST00000415277 523 ntBASIC23.13■■□□□ 1.29
CHGBP05060 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CHGBP05060 AC097488.1-201ENST00000507834 756 ntBASIC23.13■■□□□ 1.29
CHGBP05060 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 FITM1-202ENST00000559294 800 ntBASIC23.13■■□□□ 1.29
CHGBP05060 AC010947.1-201ENST00000623454 693 ntBASIC23.13■■□□□ 1.29
CHGBP05060 AC073912.3-201ENST00000624414 853 ntBASIC23.13■■□□□ 1.29
CHGBP05060 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CHGBP05060 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
CHGBP05060 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHGBP05060 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.13■■□□□ 1.29
CHGBP05060 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.12■■□□□ 1.29
CHGBP05060 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.12■■□□□ 1.29
CHGBP05060 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.12■■□□□ 1.29
CHGBP05060 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHGBP05060 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHGBP05060 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.12■■□□□ 1.29
CHGBP05060 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHGBP05060 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHGBP05060 CRYGFP-201ENST00000418459 633 ntBASIC23.12■■□□□ 1.29
CHGBP05060 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHGBP05060 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.12■■□□□ 1.29
CHGBP05060 FAM207BP-201ENST00000447172 505 ntBASIC23.12■■□□□ 1.29
CHGBP05060 SLC25A1P4-201ENST00000567977 778 ntBASIC23.12■■□□□ 1.29
CHGBP05060 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CHGBP05060 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHGBP05060 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHGBP05060 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.12■■□□□ 1.29
CHGBP05060 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHGBP05060 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.12■■□□□ 1.29
CHGBP05060 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHGBP05060 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CHGBP05060 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHGBP05060 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHGBP05060 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHGBP05060 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHGBP05060 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHGBP05060 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHGBP05060 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.11■■□□□ 1.29
CHGBP05060 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHGBP05060 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.11■■□□□ 1.29
CHGBP05060 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHGBP05060 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHGBP05060 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHGBP05060 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHGBP05060 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHGBP05060 ECEL1P3-201ENST00000427961 737 ntBASIC23.11■■□□□ 1.29
CHGBP05060 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CHGBP05060 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.11■■□□□ 1.29
CHGBP05060 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHGBP05060 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CHGBP05060 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHGBP05060 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHGBP05060 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms