Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
MT-ND3P03897 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
MT-ND3P03897 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.57■□□□□ 0.72
MT-ND3P03897 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
MT-ND3P03897 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.57■□□□□ 0.72
MT-ND3P03897 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.57■□□□□ 0.72
MT-ND3P03897 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND3P03897 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND3P03897 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
MT-ND3P03897 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND3P03897 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.56■□□□□ 0.72
MT-ND3P03897 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND3P03897 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND3P03897 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND3P03897 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.56■□□□□ 0.72
MT-ND3P03897 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND3P03897 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.56■□□□□ 0.72
MT-ND3P03897 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND3P03897 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND3P03897 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
MT-ND3P03897 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND3P03897 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND3P03897 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND3P03897 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.55■□□□□ 0.72
MT-ND3P03897 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.55■□□□□ 0.72
MT-ND3P03897 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.55■□□□□ 0.72
MT-ND3P03897 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.55■□□□□ 0.72
MT-ND3P03897 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND3P03897 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND3P03897 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND3P03897 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND3P03897 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND3P03897 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.55■□□□□ 0.72
MT-ND3P03897 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND3P03897 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.55■□□□□ 0.72
MT-ND3P03897 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.55■□□□□ 0.72
MT-ND3P03897 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND3P03897 AP003097.1-201ENST00000530657 1135 ntBASIC19.55■□□□□ 0.72
MT-ND3P03897 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.55■□□□□ 0.72
MT-ND3P03897 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
MT-ND3P03897 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MT-ND3P03897 AC060766.5-201ENST00000590539 871 ntBASIC19.55■□□□□ 0.72
MT-ND3P03897 AC006058.3-201ENST00000606217 1069 ntBASIC19.55■□□□□ 0.72
MT-ND3P03897 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.55■□□□□ 0.72
MT-ND3P03897 HLA-B-256ENST00000639848 1089 ntBASIC19.55■□□□□ 0.72
MT-ND3P03897 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND3P03897 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
MT-ND3P03897 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND3P03897 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND3P03897 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND3P03897 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND3P03897 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND3P03897 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND3P03897 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
MT-ND3P03897 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
MT-ND3P03897 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
MT-ND3P03897 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.54■□□□□ 0.72
MT-ND3P03897 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.54■□□□□ 0.72
MT-ND3P03897 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.54■□□□□ 0.72
MT-ND3P03897 AC093827.2-201ENST00000512654 315 ntBASIC19.54■□□□□ 0.72
MT-ND3P03897 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.54■□□□□ 0.72
MT-ND3P03897 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.54■□□□□ 0.72
MT-ND3P03897 C2orf69P4-201ENST00000565394 541 ntBASIC19.54■□□□□ 0.72
MT-ND3P03897 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.54■□□□□ 0.72
MT-ND3P03897 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.54■□□□□ 0.72
MT-ND3P03897 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.54■□□□□ 0.72
MT-ND3P03897 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.54■□□□□ 0.72
MT-ND3P03897 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND3P03897 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
MT-ND3P03897 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.54■□□□□ 0.72
MT-ND3P03897 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.54■□□□□ 0.72
MT-ND3P03897 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.54■□□□□ 0.72
MT-ND3P03897 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
MT-ND3P03897 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
MT-ND3P03897 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms