Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
MT-ND1P03886 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND1P03886 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
MT-ND1P03886 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND1P03886 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND1P03886 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
MT-ND1P03886 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
MT-ND1P03886 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND1P03886 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.13■□□□□ 0.49
MT-ND1P03886 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
MT-ND1P03886 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
MT-ND1P03886 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.13■□□□□ 0.49
MT-ND1P03886 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
MT-ND1P03886 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND1P03886 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.13■□□□□ 0.49
MT-ND1P03886 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.13■□□□□ 0.49
MT-ND1P03886 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND1P03886 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.13■□□□□ 0.49
MT-ND1P03886 OR10C1-204ENST00000622521 1039 ntBASIC18.13■□□□□ 0.49
MT-ND1P03886 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.13■□□□□ 0.49
MT-ND1P03886 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.13■□□□□ 0.49
MT-ND1P03886 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND1P03886 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND1P03886 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND1P03886 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND1P03886 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND1P03886 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND1P03886 AC090340.1-201ENST00000620778 4980 ntBASIC18.13■□□□□ 0.49
MT-ND1P03886 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MT-ND1P03886 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.13■□□□□ 0.49
MT-ND1P03886 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.12■□□□□ 0.49
MT-ND1P03886 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
MT-ND1P03886 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 AL031598.1-201ENST00000561511 1773 ntBASIC18.12■□□□□ 0.49
MT-ND1P03886 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
MT-ND1P03886 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.12■□□□□ 0.49
MT-ND1P03886 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.12■□□□□ 0.49
MT-ND1P03886 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.12■□□□□ 0.49
MT-ND1P03886 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.12■□□□□ 0.49
MT-ND1P03886 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
MT-ND1P03886 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
MT-ND1P03886 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.12■□□□□ 0.49
MT-ND1P03886 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.12■□□□□ 0.49
MT-ND1P03886 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MT-ND1P03886 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND1P03886 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND1P03886 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.11■□□□□ 0.49
MT-ND1P03886 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.11■□□□□ 0.49
MT-ND1P03886 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND1P03886 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND1P03886 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND1P03886 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND1P03886 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND1P03886 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND1P03886 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.11■□□□□ 0.49
MT-ND1P03886 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND1P03886 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.11■□□□□ 0.49
MT-ND1P03886 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.11■□□□□ 0.49
MT-ND1P03886 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND1P03886 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.11■□□□□ 0.49
MT-ND1P03886 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.11■□□□□ 0.49
MT-ND1P03886 AC018553.1-201ENST00000616682 1458 ntBASIC18.11■□□□□ 0.49
MT-ND1P03886 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND1P03886 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND1P03886 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.11■□□□□ 0.49
MT-ND1P03886 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
MT-ND1P03886 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.11■□□□□ 0.49
MT-ND1P03886 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND1P03886 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
MT-ND1P03886 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MT-ND1P03886 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND1P03886 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND1P03886 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND1P03886 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND1P03886 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND1P03886 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND1P03886 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND1P03886 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND1P03886 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MT-ND1P03886 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND1P03886 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.1■□□□□ 0.49
MT-ND1P03886 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND1P03886 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MT-ND1P03886 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.1■□□□□ 0.49
MT-ND1P03886 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms