Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.88□□□□□ -0.03
TRBV12-3P01733 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV12-3P01733 AC131212.4-201ENST00000623606 975 ntBASIC14.88□□□□□ -0.03
TRBV12-3P01733 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV12-3P01733 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV12-3P01733 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV12-3P01733 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRBV12-3P01733 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV12-3P01733 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV12-3P01733 AC005332.7-201ENST00000614046 2005 ntBASIC14.88□□□□□ -0.03
TRBV12-3P01733 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRBV12-3P01733 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV12-3P01733 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV12-3P01733 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV12-3P01733 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV12-3P01733 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV12-3P01733 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV12-3P01733 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV12-3P01733 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRBV12-3P01733 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRBV12-3P01733 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV12-3P01733 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.87□□□□□ -0.03
TRBV12-3P01733 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.87□□□□□ -0.03
TRBV12-3P01733 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 AP001412.1-201ENST00000608405 714 ntBASIC14.87□□□□□ -0.03
TRBV12-3P01733 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV12-3P01733 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV12-3P01733 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV12-3P01733 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRBV12-3P01733 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.87□□□□□ -0.03
TRBV12-3P01733 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV12-3P01733 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV12-3P01733 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRBV12-3P01733 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRBV12-3P01733 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRBV12-3P01733 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV12-3P01733 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 AL596275.1-201ENST00000423464 877 ntBASIC14.86□□□□□ -0.03
TRBV12-3P01733 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV12-3P01733 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV12-3P01733 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV12-3P01733 AL031985.4-201ENST00000642138 673 ntBASIC14.86□□□□□ -0.03
TRBV12-3P01733 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV12-3P01733 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV12-3P01733 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV12-3P01733 TEX21P-204ENST00000641479 1693 ntBASIC14.86□□□□□ -0.03
TRBV12-3P01733 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TRBV12-3P01733 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
TRBV12-3P01733 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV12-3P01733 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV12-3P01733 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV12-3P01733 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV12-3P01733 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV12-3P01733 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV12-3P01733 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV12-3P01733 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV12-3P01733 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV12-3P01733 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV12-3P01733 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.85□□□□□ -0.03
TRBV12-3P01733 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV12-3P01733 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV12-3P01733 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV12-3P01733 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRBV12-3P01733 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRBV12-3P01733 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms