Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-CO1P00395 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MT-CO1P00395 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.7■□□□□ 0.74
MT-CO1P00395 RCC2P6-201ENST00000526625 1557 ntBASIC19.7■□□□□ 0.74
MT-CO1P00395 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-CO1P00395 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-CO1P00395 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-CO1P00395 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.7■□□□□ 0.74
MT-CO1P00395 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-CO1P00395 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-CO1P00395 UNC93B2-201ENST00000285383 730 ntBASIC19.7■□□□□ 0.74
MT-CO1P00395 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.7■□□□□ 0.74
MT-CO1P00395 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
MT-CO1P00395 AC087499.1-201ENST00000418141 1075 ntBASIC19.7■□□□□ 0.74
MT-CO1P00395 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MT-CO1P00395 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.7■□□□□ 0.74
MT-CO1P00395 AL160286.2-201ENST00000567150 934 ntBASIC19.7■□□□□ 0.74
MT-CO1P00395 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.7■□□□□ 0.74
MT-CO1P00395 AC130371.2-201ENST00000619443 611 ntBASIC19.7■□□□□ 0.74
MT-CO1P00395 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.7■□□□□ 0.74
MT-CO1P00395 FSCN1P1-201ENST00000568912 1481 ntBASIC19.7■□□□□ 0.74
MT-CO1P00395 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MT-CO1P00395 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-CO1P00395 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-CO1P00395 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
MT-CO1P00395 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-CO1P00395 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-CO1P00395 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.69■□□□□ 0.74
MT-CO1P00395 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-CO1P00395 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.69■□□□□ 0.74
MT-CO1P00395 KRT8P9-201ENST00000558927 1449 ntBASIC19.69■□□□□ 0.74
MT-CO1P00395 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.69■□□□□ 0.74
MT-CO1P00395 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-CO1P00395 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-CO1P00395 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.69■□□□□ 0.74
MT-CO1P00395 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.69■□□□□ 0.74
MT-CO1P00395 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MT-CO1P00395 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
MT-CO1P00395 AL390955.1-201ENST00000428694 934 ntBASIC19.69■□□□□ 0.74
MT-CO1P00395 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.69■□□□□ 0.74
MT-CO1P00395 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-CO1P00395 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
MT-CO1P00395 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.69■□□□□ 0.74
MT-CO1P00395 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
MT-CO1P00395 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.69■□□□□ 0.74
MT-CO1P00395 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MT-CO1P00395 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.69■□□□□ 0.74
MT-CO1P00395 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.69■□□□□ 0.74
MT-CO1P00395 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MT-CO1P00395 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MT-CO1P00395 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-CO1P00395 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-CO1P00395 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-CO1P00395 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
MT-CO1P00395 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
MT-CO1P00395 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
MT-CO1P00395 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.68■□□□□ 0.74
MT-CO1P00395 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.68■□□□□ 0.74
MT-CO1P00395 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-CO1P00395 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-CO1P00395 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-CO1P00395 TREX1-205ENST00000625293 1783 ntBASIC19.68■□□□□ 0.74
MT-CO1P00395 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-CO1P00395 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-CO1P00395 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-CO1P00395 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-CO1P00395 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-CO1P00395 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.68■□□□□ 0.74
MT-CO1P00395 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.68■□□□□ 0.74
MT-CO1P00395 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-CO1P00395 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.68■□□□□ 0.74
MT-CO1P00395 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-CO1P00395 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.68■□□□□ 0.74
MT-CO1P00395 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.68■□□□□ 0.74
MT-CO1P00395 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
MT-CO1P00395 MMP23A-201ENST00000234610 1017 ntBASIC19.67■□□□□ 0.74
MT-CO1P00395 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MT-CO1P00395 MIR1238-201ENST00000408483 83 ntBASIC19.67■□□□□ 0.74
MT-CO1P00395 ECEL1P3-201ENST00000427961 737 ntBASIC19.67■□□□□ 0.74
MT-CO1P00395 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-CO1P00395 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.67■□□□□ 0.74
MT-CO1P00395 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
MT-CO1P00395 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.67■□□□□ 0.74
MT-CO1P00395 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.67■□□□□ 0.74
MT-CO1P00395 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.67■□□□□ 0.74
MT-CO1P00395 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-CO1P00395 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MT-CO1P00395 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-CO1P00395 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
MT-CO1P00395 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.67■□□□□ 0.74
MT-CO1P00395 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.67■□□□□ 0.74
MT-CO1P00395 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-CO1P00395 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
MT-CO1P00395 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-CO1P00395 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MT-CO1P00395 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-CO1P00395 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.66■□□□□ 0.74
MT-CO1P00395 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MT-CO1P00395 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-CO1P00395 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms