Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.17■□□□□ 0.82
TRUB2O95900 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.17■□□□□ 0.82
TRUB2O95900 AC098818.2-201ENST00000564925 2320 ntBASIC20.17■□□□□ 0.82
TRUB2O95900 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB2O95900 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TRUB2O95900 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRUB2O95900 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB2O95900 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.17■□□□□ 0.82
TRUB2O95900 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB2O95900 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.17■□□□□ 0.82
TRUB2O95900 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB2O95900 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB2O95900 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TRUB2O95900 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB2O95900 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB2O95900 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.17■□□□□ 0.82
TRUB2O95900 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.17■□□□□ 0.82
TRUB2O95900 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.16■□□□□ 0.82
TRUB2O95900 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRUB2O95900 TEX21P-204ENST00000641479 1693 ntBASIC20.16■□□□□ 0.82
TRUB2O95900 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.16■□□□□ 0.82
TRUB2O95900 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRUB2O95900 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRUB2O95900 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.16■□□□□ 0.82
TRUB2O95900 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
TRUB2O95900 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.16■□□□□ 0.82
TRUB2O95900 AC004980.1-204ENST00000429707 299 ntBASIC20.16■□□□□ 0.82
TRUB2O95900 TSPY7P-201ENST00000431358 1114 ntBASIC20.16■□□□□ 0.82
TRUB2O95900 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRUB2O95900 AL160286.2-201ENST00000567150 934 ntBASIC20.16■□□□□ 0.82
TRUB2O95900 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRUB2O95900 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRUB2O95900 AC131212.4-201ENST00000623606 975 ntBASIC20.16■□□□□ 0.82
TRUB2O95900 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRUB2O95900 AP000974.1-201ENST00000623909 2387 ntBASIC20.16■□□□□ 0.82
TRUB2O95900 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.16■□□□□ 0.82
TRUB2O95900 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRUB2O95900 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRUB2O95900 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TRUB2O95900 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRUB2O95900 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
TRUB2O95900 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRUB2O95900 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRUB2O95900 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRUB2O95900 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TRUB2O95900 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TRUB2O95900 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRUB2O95900 AL596275.1-201ENST00000423464 877 ntBASIC20.15■□□□□ 0.82
TRUB2O95900 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRUB2O95900 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.15■□□□□ 0.82
TRUB2O95900 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.15■□□□□ 0.82
TRUB2O95900 MIR4497-201ENST00000583208 89 ntBASIC20.15■□□□□ 0.82
TRUB2O95900 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.15■□□□□ 0.82
TRUB2O95900 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.15■□□□□ 0.82
TRUB2O95900 AL031985.4-201ENST00000642138 673 ntBASIC20.15■□□□□ 0.82
TRUB2O95900 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRUB2O95900 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.15■□□□□ 0.82
TRUB2O95900 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRUB2O95900 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB2O95900 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB2O95900 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB2O95900 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB2O95900 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB2O95900 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB2O95900 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB2O95900 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.14■□□□□ 0.81
TRUB2O95900 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB2O95900 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB2O95900 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB2O95900 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.14■□□□□ 0.81
TRUB2O95900 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRUB2O95900 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.14■□□□□ 0.81
TRUB2O95900 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.14■□□□□ 0.81
TRUB2O95900 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TRUB2O95900 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.14■□□□□ 0.81
TRUB2O95900 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TRUB2O95900 AC141586.3-201ENST00000562166 1838 ntBASIC20.13■□□□□ 0.81
TRUB2O95900 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB2O95900 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TRUB2O95900 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB2O95900 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB2O95900 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.13■□□□□ 0.81
TRUB2O95900 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB2O95900 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.13■□□□□ 0.81
TRUB2O95900 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB2O95900 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.13■□□□□ 0.81
TRUB2O95900 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB2O95900 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.13■□□□□ 0.81
TRUB2O95900 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.13■□□□□ 0.81
TRUB2O95900 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
TRUB2O95900 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB2O95900 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.13■□□□□ 0.81
TRUB2O95900 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.13■□□□□ 0.81
TRUB2O95900 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB2O95900 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB2O95900 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB2O95900 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB2O95900 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB2O95900 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRUB2O95900 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms