Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 CD320-202ENST00000537716 1119 ntTSL 2 BASIC30.05■■■□□ 2.4
PCF11O94913 AL512604.3-201ENST00000569583 964 ntBASIC30.05■■■□□ 2.4
PCF11O94913 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
PCF11O94913 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC30.05■■■□□ 2.4
PCF11O94913 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC30.05■■■□□ 2.4
PCF11O94913 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC30.05■■■□□ 2.4
PCF11O94913 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC30.05■■■□□ 2.4
PCF11O94913 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
PCF11O94913 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
PCF11O94913 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
PCF11O94913 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC30.04■■■□□ 2.4
PCF11O94913 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PCF11O94913 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PCF11O94913 PHB2-202ENST00000440277 996 ntTSL 5 BASIC30.04■■■□□ 2.4
PCF11O94913 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC30.04■■■□□ 2.4
PCF11O94913 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
PCF11O94913 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC30.04■■■□□ 2.4
PCF11O94913 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PCF11O94913 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
PCF11O94913 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC30.04■■■□□ 2.4
PCF11O94913 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
PCF11O94913 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC30.03■■■□□ 2.4
PCF11O94913 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PCF11O94913 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PCF11O94913 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC30.03■■■□□ 2.4
PCF11O94913 CLN6-204ENST00000564752 900 ntTSL 3 BASIC30.03■■■□□ 2.4
PCF11O94913 DBP-204ENST00000599385 709 ntTSL 3 BASIC30.03■■■□□ 2.4
PCF11O94913 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC30.03■■■□□ 2.4
PCF11O94913 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
PCF11O94913 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
PCF11O94913 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC30.03■■■□□ 2.4
PCF11O94913 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
PCF11O94913 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
PCF11O94913 GPAT2P1-201ENST00000444924 1672 ntBASIC30.03■■■□□ 2.4
PCF11O94913 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PCF11O94913 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC30.03■■■□□ 2.4
PCF11O94913 AC112907.2-201ENST00000448639 330 ntBASIC30.03■■■□□ 2.4
PCF11O94913 FAM86EP-206ENST00000510506 987 ntBASIC30.03■■■□□ 2.4
PCF11O94913 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC30.03■■■□□ 2.4
PCF11O94913 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
PCF11O94913 GPALPP1-207ENST00000611650 899 ntBASIC30.03■■■□□ 2.4
PCF11O94913 AC116407.4-201ENST00000623319 1061 ntBASIC30.03■■■□□ 2.4
PCF11O94913 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
PCF11O94913 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC30.02■■■□□ 2.4
PCF11O94913 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PCF11O94913 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
PCF11O94913 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC30.02■■■□□ 2.4
PCF11O94913 BUB3-202ENST00000368859 667 ntTSL 3 BASIC30.02■■■□□ 2.4
PCF11O94913 AP000523.1-201ENST00000398242 1049 ntBASIC30.02■■■□□ 2.4
PCF11O94913 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC30.02■■■□□ 2.4
PCF11O94913 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
PCF11O94913 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
PCF11O94913 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
PCF11O94913 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC30.02■■■□□ 2.4
PCF11O94913 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PCF11O94913 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC30.01■■■□□ 2.39
PCF11O94913 HOMER2P1-201ENST00000455653 964 ntBASIC30.01■■■□□ 2.39
PCF11O94913 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC30.01■■■□□ 2.39
PCF11O94913 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC30.01■■■□□ 2.39
PCF11O94913 CLN6-214ENST00000636314 442 ntTSL 3 BASIC30.01■■■□□ 2.39
PCF11O94913 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
PCF11O94913 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
PCF11O94913 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
PCF11O94913 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
PCF11O94913 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
PCF11O94913 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
PCF11O94913 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PCF11O94913 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PCF11O94913 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC30■■■□□ 2.39
PCF11O94913 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PCF11O94913 PVRIG2P-201ENST00000435460 978 ntBASIC30■■■□□ 2.39
PCF11O94913 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC30■■■□□ 2.39
PCF11O94913 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC30■■■□□ 2.39
PCF11O94913 VENTXP5-201ENST00000523979 775 ntBASIC30■■■□□ 2.39
PCF11O94913 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC30■■■□□ 2.39
PCF11O94913 CLEC4GP1-201ENST00000596555 870 ntBASIC30■■■□□ 2.39
PCF11O94913 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC30■■■□□ 2.39
PCF11O94913 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
PCF11O94913 MED25-212ENST00000618715 1467 ntTSL 5 BASIC30■■■□□ 2.39
PCF11O94913 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC30■■■□□ 2.39
PCF11O94913 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC29.99■■■□□ 2.39
PCF11O94913 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC29.99■■■□□ 2.39
PCF11O94913 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC29.99■■■□□ 2.39
PCF11O94913 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
PCF11O94913 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
PCF11O94913 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
PCF11O94913 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
PCF11O94913 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC29.99■■■□□ 2.39
PCF11O94913 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
PCF11O94913 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC29.99■■■□□ 2.39
PCF11O94913 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC29.99■■■□□ 2.39
PCF11O94913 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC29.99■■■□□ 2.39
PCF11O94913 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
PCF11O94913 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
PCF11O94913 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
PCF11O94913 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
PCF11O94913 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
PCF11O94913 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC29.99■■■□□ 2.39
PCF11O94913 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC29.99■■■□□ 2.39
PCF11O94913 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms