Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AC073912.3-201ENST00000624414 853 ntBASIC18.62■□□□□ 0.57
CNOT3O75175 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT3O75175 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT3O75175 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT3O75175 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CNOT3O75175 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT3O75175 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CNOT3O75175 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT3O75175 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT3O75175 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT3O75175 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT3O75175 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CNOT3O75175 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT3O75175 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.61■□□□□ 0.57
CNOT3O75175 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT3O75175 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CNOT3O75175 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.61■□□□□ 0.57
CNOT3O75175 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT3O75175 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT3O75175 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.61■□□□□ 0.57
CNOT3O75175 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CNOT3O75175 KRT17P2-201ENST00000300992 1314 ntBASIC18.61■□□□□ 0.57
CNOT3O75175 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
CNOT3O75175 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.61■□□□□ 0.57
CNOT3O75175 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.61■□□□□ 0.57
CNOT3O75175 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT3O75175 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.61■□□□□ 0.57
CNOT3O75175 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.61■□□□□ 0.57
CNOT3O75175 BX088651.1-201ENST00000540551 451 ntBASIC18.61■□□□□ 0.57
CNOT3O75175 AL355075.4-201ENST00000554988 638 ntBASIC18.61■□□□□ 0.57
CNOT3O75175 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.61■□□□□ 0.57
CNOT3O75175 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.61■□□□□ 0.57
CNOT3O75175 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.61■□□□□ 0.57
CNOT3O75175 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT3O75175 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT3O75175 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT3O75175 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT3O75175 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT3O75175 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT3O75175 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT3O75175 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT3O75175 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CNOT3O75175 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.61■□□□□ 0.57
CNOT3O75175 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CNOT3O75175 AC116351.2-201ENST00000606540 1585 ntBASIC18.6■□□□□ 0.57
CNOT3O75175 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 AC090340.1-201ENST00000620778 4980 ntBASIC18.6■□□□□ 0.57
CNOT3O75175 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 MIR4785-201ENST00000585005 73 ntBASIC18.6■□□□□ 0.57
CNOT3O75175 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 TNXA-203ENST00000507684 2038 ntBASIC18.6■□□□□ 0.57
CNOT3O75175 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 AC004408.2-201ENST00000623613 2777 ntBASIC18.6■□□□□ 0.57
CNOT3O75175 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CNOT3O75175 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT3O75175 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CNOT3O75175 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT3O75175 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CNOT3O75175 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT3O75175 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
CNOT3O75175 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT3O75175 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.59■□□□□ 0.57
CNOT3O75175 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.59■□□□□ 0.57
CNOT3O75175 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT3O75175 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT3O75175 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT3O75175 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.59■□□□□ 0.57
CNOT3O75175 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.59■□□□□ 0.57
CNOT3O75175 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT3O75175 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CNOT3O75175 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT3O75175 FAM197Y1-201ENST00000421178 764 ntBASIC18.59■□□□□ 0.57
CNOT3O75175 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT3O75175 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.59■□□□□ 0.57
CNOT3O75175 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.59■□□□□ 0.57
CNOT3O75175 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.59■□□□□ 0.57
CNOT3O75175 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CNOT3O75175 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.59■□□□□ 0.57
CNOT3O75175 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.59■□□□□ 0.57
CNOT3O75175 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.59■□□□□ 0.57
CNOT3O75175 CD177P1-201ENST00000606252 935 ntBASIC18.59■□□□□ 0.57
CNOT3O75175 AC004264.1-201ENST00000608354 794 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms