Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
XRCC2O43543 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
XRCC2O43543 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.71■□□□□ 0.27
XRCC2O43543 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.71■□□□□ 0.27
XRCC2O43543 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.71■□□□□ 0.27
XRCC2O43543 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
XRCC2O43543 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
XRCC2O43543 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
XRCC2O43543 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC2O43543 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC2O43543 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC2O43543 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.7■□□□□ 0.26
XRCC2O43543 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
XRCC2O43543 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC2O43543 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
XRCC2O43543 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC2O43543 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC2O43543 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.7■□□□□ 0.26
XRCC2O43543 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC2O43543 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC2O43543 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
XRCC2O43543 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.7■□□□□ 0.26
XRCC2O43543 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC2O43543 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.7■□□□□ 0.26
XRCC2O43543 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
XRCC2O43543 AC239809.2-201ENST00000415381 517 ntBASIC16.7■□□□□ 0.26
XRCC2O43543 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC2O43543 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.7■□□□□ 0.26
XRCC2O43543 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.7■□□□□ 0.26
XRCC2O43543 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC2O43543 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
XRCC2O43543 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.7■□□□□ 0.26
XRCC2O43543 LINC01465-201ENST00000408887 1940 ntBASIC16.7■□□□□ 0.26
XRCC2O43543 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC2O43543 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.7■□□□□ 0.26
XRCC2O43543 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC2O43543 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.7■□□□□ 0.26
XRCC2O43543 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.7■□□□□ 0.26
XRCC2O43543 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
XRCC2O43543 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
XRCC2O43543 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.7■□□□□ 0.26
XRCC2O43543 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
XRCC2O43543 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.69■□□□□ 0.26
XRCC2O43543 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.69■□□□□ 0.26
XRCC2O43543 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.69■□□□□ 0.26
XRCC2O43543 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
XRCC2O43543 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
XRCC2O43543 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 C1QL1P1-201ENST00000568105 661 ntBASIC16.69■□□□□ 0.26
XRCC2O43543 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.69■□□□□ 0.26
XRCC2O43543 AC020763.4-201ENST00000623414 4170 ntBASIC16.69■□□□□ 0.26
XRCC2O43543 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
XRCC2O43543 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
XRCC2O43543 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
XRCC2O43543 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.69■□□□□ 0.26
XRCC2O43543 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC2O43543 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC2O43543 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.68■□□□□ 0.26
XRCC2O43543 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
XRCC2O43543 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC2O43543 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC2O43543 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.68■□□□□ 0.26
XRCC2O43543 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC2O43543 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.68■□□□□ 0.26
XRCC2O43543 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.68■□□□□ 0.26
XRCC2O43543 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.68■□□□□ 0.26
XRCC2O43543 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC2O43543 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC2O43543 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
XRCC2O43543 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.68■□□□□ 0.26
XRCC2O43543 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC2O43543 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC2O43543 AC004408.2-201ENST00000623613 2777 ntBASIC16.68■□□□□ 0.26
XRCC2O43543 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
XRCC2O43543 TEX21P-204ENST00000641479 1693 ntBASIC16.68■□□□□ 0.26
XRCC2O43543 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC2O43543 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC2O43543 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
XRCC2O43543 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
XRCC2O43543 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms