Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP3D1O14617 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3D1O14617 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3D1O14617 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.97■□□□□ 0.47
AP3D1O14617 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.97■□□□□ 0.47
AP3D1O14617 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.97■□□□□ 0.47
AP3D1O14617 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.97■□□□□ 0.47
AP3D1O14617 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.97■□□□□ 0.47
AP3D1O14617 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.97■□□□□ 0.47
AP3D1O14617 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3D1O14617 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3D1O14617 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3D1O14617 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
AP3D1O14617 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP3D1O14617 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3D1O14617 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3D1O14617 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.97■□□□□ 0.47
AP3D1O14617 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3D1O14617 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3D1O14617 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.97■□□□□ 0.47
AP3D1O14617 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3D1O14617 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.96■□□□□ 0.47
AP3D1O14617 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3D1O14617 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.96■□□□□ 0.47
AP3D1O14617 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP3D1O14617 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.96■□□□□ 0.47
AP3D1O14617 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3D1O14617 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
AP3D1O14617 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3D1O14617 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3D1O14617 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
AP3D1O14617 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3D1O14617 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.96■□□□□ 0.47
AP3D1O14617 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP3D1O14617 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.96■□□□□ 0.47
AP3D1O14617 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
AP3D1O14617 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.96■□□□□ 0.47
AP3D1O14617 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.96■□□□□ 0.47
AP3D1O14617 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
AP3D1O14617 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.96■□□□□ 0.47
AP3D1O14617 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
AP3D1O14617 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3D1O14617 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3D1O14617 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
AP3D1O14617 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3D1O14617 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3D1O14617 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.96■□□□□ 0.47
AP3D1O14617 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.96■□□□□ 0.47
AP3D1O14617 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
AP3D1O14617 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3D1O14617 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
AP3D1O14617 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP3D1O14617 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
AP3D1O14617 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP3D1O14617 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3D1O14617 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP3D1O14617 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3D1O14617 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.95■□□□□ 0.46
AP3D1O14617 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
AP3D1O14617 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.95■□□□□ 0.46
AP3D1O14617 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.95■□□□□ 0.46
AP3D1O14617 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3D1O14617 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.95■□□□□ 0.46
AP3D1O14617 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3D1O14617 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.95■□□□□ 0.46
AP3D1O14617 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3D1O14617 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3D1O14617 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
AP3D1O14617 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP3D1O14617 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
AP3D1O14617 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP3D1O14617 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.95■□□□□ 0.46
AP3D1O14617 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3D1O14617 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
AP3D1O14617 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3D1O14617 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3D1O14617 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3D1O14617 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
AP3D1O14617 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP3D1O14617 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3D1O14617 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.94■□□□□ 0.46
AP3D1O14617 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3D1O14617 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3D1O14617 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.94■□□□□ 0.46
AP3D1O14617 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
AP3D1O14617 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.94■□□□□ 0.46
AP3D1O14617 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3D1O14617 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP3D1O14617 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3D1O14617 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.94■□□□□ 0.46
AP3D1O14617 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3D1O14617 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
AP3D1O14617 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.94■□□□□ 0.46
AP3D1O14617 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.94■□□□□ 0.46
AP3D1O14617 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.94■□□□□ 0.46
AP3D1O14617 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
AP3D1O14617 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.94■□□□□ 0.46
AP3D1O14617 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3D1O14617 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP3D1O14617 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms