Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM38O00635 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM38O00635 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM38O00635 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM38O00635 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM38O00635 AC116562.2-201ENST00000507042 360 ntBASIC19.34■□□□□ 0.69
TRIM38O00635 KRT18P35-201ENST00000510488 1269 ntBASIC19.34■□□□□ 0.69
TRIM38O00635 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.34■□□□□ 0.69
TRIM38O00635 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRIM38O00635 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.34■□□□□ 0.69
TRIM38O00635 AC092865.7-201ENST00000641832 219 ntBASIC19.34■□□□□ 0.69
TRIM38O00635 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TRIM38O00635 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRIM38O00635 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM38O00635 CYP2D8P-201ENST00000433633 1490 ntBASIC19.34■□□□□ 0.69
TRIM38O00635 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM38O00635 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM38O00635 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM38O00635 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.33■□□□□ 0.69
TRIM38O00635 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM38O00635 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM38O00635 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM38O00635 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.33■□□□□ 0.69
TRIM38O00635 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM38O00635 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM38O00635 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM38O00635 AC005521.1-201ENST00000393351 872 ntBASIC19.33■□□□□ 0.68
TRIM38O00635 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.33■□□□□ 0.68
TRIM38O00635 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM38O00635 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.33■□□□□ 0.68
TRIM38O00635 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.33■□□□□ 0.68
TRIM38O00635 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.33■□□□□ 0.68
TRIM38O00635 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.33■□□□□ 0.68
TRIM38O00635 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM38O00635 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM38O00635 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM38O00635 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM38O00635 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.33■□□□□ 0.68
TRIM38O00635 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.33■□□□□ 0.68
TRIM38O00635 LINC01568-207ENST00000641790 1380 ntBASIC19.32■□□□□ 0.68
TRIM38O00635 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM38O00635 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM38O00635 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TRIM38O00635 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TRIM38O00635 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRIM38O00635 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM38O00635 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM38O00635 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.32■□□□□ 0.68
TRIM38O00635 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.32■□□□□ 0.68
TRIM38O00635 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM38O00635 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
TRIM38O00635 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM38O00635 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM38O00635 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM38O00635 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM38O00635 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM38O00635 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM38O00635 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
TRIM38O00635 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM38O00635 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM38O00635 KRT16P1-201ENST00000399124 1418 ntBASIC19.32■□□□□ 0.68
TRIM38O00635 TMEM179-206ENST00000616017 1645 ntBASIC19.32■□□□□ 0.68
TRIM38O00635 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM38O00635 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM38O00635 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM38O00635 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM38O00635 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM38O00635 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM38O00635 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM38O00635 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM38O00635 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM38O00635 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM38O00635 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM38O00635 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM38O00635 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM38O00635 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM38O00635 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM38O00635 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM38O00635 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRIM38O00635 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM38O00635 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM38O00635 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM38O00635 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.31■□□□□ 0.68
TRIM38O00635 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM38O00635 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM38O00635 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM38O00635 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRIM38O00635 FITM1-202ENST00000559294 800 ntBASIC19.31■□□□□ 0.68
TRIM38O00635 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM38O00635 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM38O00635 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.31■□□□□ 0.68
TRIM38O00635 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM38O00635 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM38O00635 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
TRIM38O00635 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM38O00635 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM38O00635 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM38O00635 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM38O00635 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM38O00635 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms