Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM1O00151 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM1O00151 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM1O00151 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM1O00151 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.29■□□□□ 0.52
PDLIM1O00151 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM1O00151 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.29■□□□□ 0.52
PDLIM1O00151 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM1O00151 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PDLIM1O00151 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM1O00151 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PDLIM1O00151 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM1O00151 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.28■□□□□ 0.52
PDLIM1O00151 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM1O00151 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.28■□□□□ 0.52
PDLIM1O00151 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM1O00151 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.28■□□□□ 0.52
PDLIM1O00151 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.28■□□□□ 0.52
PDLIM1O00151 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM1O00151 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM1O00151 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.28■□□□□ 0.52
PDLIM1O00151 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM1O00151 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM1O00151 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM1O00151 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM1O00151 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM1O00151 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM1O00151 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM1O00151 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM1O00151 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM1O00151 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM1O00151 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM1O00151 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PDLIM1O00151 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM1O00151 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM1O00151 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
PDLIM1O00151 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM1O00151 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM1O00151 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM1O00151 PTBP1P-201ENST00000554374 1601 ntBASIC18.27■□□□□ 0.52
PDLIM1O00151 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.27■□□□□ 0.52
PDLIM1O00151 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.27■□□□□ 0.52
PDLIM1O00151 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM1O00151 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.27■□□□□ 0.52
PDLIM1O00151 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM1O00151 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.27■□□□□ 0.52
PDLIM1O00151 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM1O00151 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM1O00151 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM1O00151 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM1O00151 AL591742.1-201ENST00000604433 565 ntBASIC18.27■□□□□ 0.52
PDLIM1O00151 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.27■□□□□ 0.52
PDLIM1O00151 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.27■□□□□ 0.52
PDLIM1O00151 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.27■□□□□ 0.52
PDLIM1O00151 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM1O00151 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM1O00151 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDLIM1O00151 MKRN4P-201ENST00000444706 1521 ntBASIC18.27■□□□□ 0.51
PDLIM1O00151 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PDLIM1O00151 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDLIM1O00151 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.27■□□□□ 0.51
PDLIM1O00151 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
PDLIM1O00151 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.26■□□□□ 0.51
PDLIM1O00151 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM1O00151 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PDLIM1O00151 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM1O00151 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM1O00151 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
PDLIM1O00151 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM1O00151 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM1O00151 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PDLIM1O00151 CYP2T1P-201ENST00000432607 1285 ntBASIC18.26■□□□□ 0.51
PDLIM1O00151 NCF1B-203ENST00000435988 1254 ntBASIC18.26■□□□□ 0.51
PDLIM1O00151 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.26■□□□□ 0.51
PDLIM1O00151 AC006970.2-201ENST00000450065 779 ntBASIC18.26■□□□□ 0.51
PDLIM1O00151 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
PDLIM1O00151 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PDLIM1O00151 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
PDLIM1O00151 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PDLIM1O00151 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM1O00151 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PDLIM1O00151 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM1O00151 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM1O00151 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM1O00151 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM1O00151 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM1O00151 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 AP001271.2-201ENST00000624018 1556 ntBASIC18.25■□□□□ 0.51
PDLIM1O00151 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.25■□□□□ 0.51
PDLIM1O00151 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PDLIM1O00151 WIZP1-201ENST00000531444 2299 ntBASIC18.25■□□□□ 0.51
PDLIM1O00151 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms