Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00473A8K010 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LINC00473A8K010 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
LINC00473A8K010 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00473A8K010 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LINC00473A8K010 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00473A8K010 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
LINC00473A8K010 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC00473A8K010 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
LINC00473A8K010 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00473A8K010 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00473A8K010 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.66■□□□□ 0.1
LINC00473A8K010 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.66■□□□□ 0.1
LINC00473A8K010 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC00473A8K010 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.66■□□□□ 0.1
LINC00473A8K010 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00473A8K010 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00473A8K010 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.66■□□□□ 0.1
LINC00473A8K010 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
LINC00473A8K010 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00473A8K010 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00473A8K010 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00473A8K010 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00473A8K010 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00473A8K010 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LINC00473A8K010 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00473A8K010 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.66■□□□□ 0.1
LINC00473A8K010 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00473A8K010 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00473A8K010 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00473A8K010 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LINC00473A8K010 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LINC00473A8K010 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
LINC00473A8K010 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00473A8K010 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC00473A8K010 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00473A8K010 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
LINC00473A8K010 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00473A8K010 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
LINC00473A8K010 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.65■□□□□ 0.1
LINC00473A8K010 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00473A8K010 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00473A8K010 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00473A8K010 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LINC00473A8K010 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.65■□□□□ 0.1
LINC00473A8K010 AC104771.1-201ENST00000603335 964 ntBASIC15.65■□□□□ 0.1
LINC00473A8K010 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LINC00473A8K010 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00473A8K010 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00473A8K010 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00473A8K010 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00473A8K010 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00473A8K010 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00473A8K010 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.65■□□□□ 0.1
LINC00473A8K010 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.65■□□□□ 0.1
LINC00473A8K010 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LINC00473A8K010 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
LINC00473A8K010 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
LINC00473A8K010 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.64■□□□□ 0.1
LINC00473A8K010 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC00473A8K010 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC00473A8K010 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
LINC00473A8K010 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
LINC00473A8K010 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC00473A8K010 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.64■□□□□ 0.09
LINC00473A8K010 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 AC142086.2-201ENST00000569753 217 ntBASIC15.64■□□□□ 0.09
LINC00473A8K010 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC00473A8K010 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LINC00473A8K010 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LINC00473A8K010 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC00473A8K010 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC00473A8K010 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LINC00473A8K010 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.64■□□□□ 0.09
LINC00473A8K010 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.64■□□□□ 0.09
LINC00473A8K010 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00473A8K010 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LINC00473A8K010 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms