Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 GCSHP5-201ENST00000443090 522 ntBASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TCRBV5S1A1TA0A578 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV5S1A1TA0A578 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV5S1A1TA0A578 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV5S1A1TA0A578 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV5S1A1TA0A578 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV5S1A1TA0A578 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TCRBV5S1A1TA0A578 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.08■□□□□ 0.81
TCRBV5S1A1TA0A578 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TCRBV5S1A1TA0A578 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.08■□□□□ 0.81
TCRBV5S1A1TA0A578 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.08■□□□□ 0.81
TCRBV5S1A1TA0A578 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.08■□□□□ 0.81
TCRBV5S1A1TA0A578 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.08■□□□□ 0.81
TCRBV5S1A1TA0A578 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.08■□□□□ 0.8
TCRBV5S1A1TA0A578 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.08■□□□□ 0.8
TCRBV5S1A1TA0A578 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TCRBV5S1A1TA0A578 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 AL353807.1-201ENST00000427475 662 ntBASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 AP002982.1-201ENST00000492365 877 ntBASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
TCRBV5S1A1TA0A578 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 KRT8P11-201ENST00000409686 1436 ntBASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 AC008040.2-201ENST00000461049 708 ntBASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 AC131212.4-201ENST00000623606 975 ntBASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV5S1A1TA0A578 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 RCC2P6-201ENST00000526625 1557 ntBASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 AC091390.4-202ENST00000476426 537 ntBASIC20.05■□□□□ 0.8
TCRBV5S1A1TA0A578 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms