Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 KRT18P16-201ENST00000510337 1294 ntBASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 HLA-B-256ENST00000639848 1089 ntBASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 MYC-209ENST00000641252 345 ntBASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TCRBV9S1A1TA0A576 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 AC006970.2-201ENST00000450065 779 ntBASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 AC090164.3-201ENST00000610780 2143 ntBASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV9S1A1TA0A576 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 FEM1AP3-201ENST00000403722 1741 ntBASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TCRBV9S1A1TA0A576 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms