Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 AC006970.2-201ENST00000450065 779 ntBASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 OR6D1P-202ENST00000641007 5290 ntBASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF103-CHMP3A0A140T963 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF103-CHMP3A0A140T963 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 AL121832.2-201ENST00000610979 668 ntBASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF103-CHMP3A0A140T963 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 AC018553.1-201ENST00000616682 1458 ntBASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms