Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 AL160286.2-201ENST00000567150 934 ntBASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 RPPH1-201ENST00000516869 333 ntBASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 AC006333.2-201ENST00000607957 2099 ntBASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 RNF165-205ENST00000588679 2904 ntBASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.98■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 PRORSD1P-201ENST00000295112 541 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms