Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV27A0A087WT01 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 KRT18P16-201ENST00000510337 1294 ntBASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 AC104771.1-201ENST00000603335 964 ntBASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 AL121829.2-201ENST00000620908 328 ntBASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV27A0A087WT01 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 TUBB8P6-201ENST00000436895 1288 ntBASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 NEFHP1-201ENST00000412845 2629 ntBASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV27A0A087WT01 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 AC142086.2-201ENST00000569753 217 ntBASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms