Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLDND2Q8NHS1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDND2Q8NHS1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 DCAF13P1-201ENST00000495256 1330 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 SNORA70E-201ENST00000384492 135 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 GSTA8P-201ENST00000404253 637 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AC105402.1-201ENST00000413336 545 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AC004022.2-201ENST00000413824 193 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 SDCBPP3-201ENST00000419629 891 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 RPL7P44-201ENST00000424827 742 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 ELOCP6-201ENST00000429066 328 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 MTCO1P52-201ENST00000433928 531 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 MTCYBP31-201ENST00000438855 1122 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 ELOCP12-201ENST00000458706 328 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AP001992.1-205ENST00000462248 379 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 RPL9P32-201ENST00000464118 620 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AL136126.1-201ENST00000473603 402 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AC109925.1-201ENST00000478069 331 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 RPS3AP43-201ENST00000479743 781 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 RPL7P23-201ENST00000493874 747 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 TRAV31-201ENST00000502780 342 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 PCNAP1-201ENST00000505363 709 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 RNU1-143P-201ENST00000516296 146 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 RN7SKP82-201ENST00000516786 223 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AC106782.4-201ENST00000568264 210 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AC069304.3-201ENST00000603938 1084 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AP003117.2-201ENST00000606010 545 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 U1.23-201ENST00000610293 146 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AL157817.1-201ENST00000614264 790 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AL162274.2-201ENST00000614406 332 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 RNU1-68P-201ENST00000615382 146 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 U1.39-201ENST00000621562 146 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 AC017071.1-201ENST00000564407 2204 ntBASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.73□□□□□ -1.97
CLDND2Q8NHS1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 U3.6-201ENST00000363622 211 ntBASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 AC004987.3-201ENST00000413879 771 ntBASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 PRELID3BP11-201ENST00000414230 479 ntBASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 MED6P1-201ENST00000439659 713 ntBASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 ATP5C1P1-201ENST00000441945 895 ntBASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 RN7SL863P-201ENST00000462370 296 ntBASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 AC006445.1-201ENST00000491925 405 ntBASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 Vault.1-201ENST00000516474 102 ntBASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 SCARNA13-201ENST00000516672 275 ntBASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 SCARNA20.6-201ENST00000517251 106 ntBASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 PTP4A1P6-201ENST00000531034 478 ntBASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 AC135803.1-201ENST00000608748 565 ntBASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 AC107081.3-201ENST00000612715 2034 ntBASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 AC093831.2-201ENST00000624393 3427 ntBASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.72□□□□□ -1.97
CLDND2Q8NHS1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDND2Q8NHS1 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDND2Q8NHS1 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDND2Q8NHS1 RNU1-70P-201ENST00000362618 164 ntBASIC2.71□□□□□ -1.98
CLDND2Q8NHS1 DYNLT3P1-201ENST00000378574 347 ntBASIC2.71□□□□□ -1.98
CLDND2Q8NHS1 MIR634-201ENST00000385208 97 ntBASIC2.71□□□□□ -1.98
CLDND2Q8NHS1 CCNB2P1-201ENST00000399411 1150 ntBASIC2.71□□□□□ -1.98
CLDND2Q8NHS1 RNU6-564P-201ENST00000410983 104 ntBASIC2.71□□□□□ -1.98
CLDND2Q8NHS1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLDND2Q8NHS1 RNF19BPX-201ENST00000426224 625 ntBASIC2.71□□□□□ -1.98
CLDND2Q8NHS1 AC244505.4-201ENST00000434905 287 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms