RNA–Protein interactions for RNA: ENST00000339524.3

RNF17-204, Transcript of ring finger protein 17, humanhuman

TSL 2 BASIC

Gene RNF17, Length 2,203 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF17-204ENST00000339524 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
RNF17-204ENST00000339524 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
RNF17-204ENST00000339524 SENP3Q9H4L4 574 aaPredicted RBP17.78■□□□□ 0.44
RNF17-204ENST00000339524 PHF23Q9BUL5 403 aaPredicted RBP17.55■□□□□ 0.4
RNF17-204ENST00000339524 FOXD1Q16676 465 aa16.54■□□□□ 0.24
RNF17-204ENST00000339524 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
RNF17-204ENST00000339524 PPP6R1Q9UPN7 881 aa15.53■□□□□ 0.08
RNF17-204ENST00000339524 ADRA2BP18089 450 aa15.48■□□□□ 0.07
RNF17-204ENST00000339524 MSH5O43196 834 aa15.47■□□□□ 0.07
RNF17-204ENST00000339524 PIAS4Q8N2W9 510 aaPredicted RBP15.47■□□□□ 0.07
RNF17-204ENST00000339524 POTEDQ86YR6 584 aa14.9□□□□□ -0.02
RNF17-204ENST00000339524 SCAF1Q9H7N4 1312 aaKnown RBP14.19□□□□□ -0.14
RNF17-204ENST00000339524 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
RNF17-204ENST00000339524 DMRT2Q9Y5R5 561 aa14.12□□□□□ -0.15
RNF17-204ENST00000339524 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
RNF17-204ENST00000339524 CNKSR2Q8WXI2 1034 aa13.71□□□□□ -0.22
RNF17-204ENST00000339524 HOXD11P31277 338 aaPredicted RBP13.65□□□□□ -0.22
RNF17-204ENST00000339524 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
RNF17-204ENST00000339524 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
RNF17-204ENST00000339524 DCAF8L1A6NGE4 600 aa13.47□□□□□ -0.25
RNF17-204ENST00000339524 NPM3O75607 178 aaKnown RBP13.28□□□□□ -0.28
RNF17-204ENST00000339524 RNF39Q9H2S5 420 aa13.2□□□□□ -0.3
RNF17-204ENST00000339524 DNAJC5BQ9UF47 199 aa13.2□□□□□ -0.3
RNF17-204ENST00000339524 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
RNF17-204ENST00000339524 KCNA4P22459 653 aa13.09□□□□□ -0.31
RNF17-204ENST00000339524 C1QBPQ07021 282 aaKnown RBP13.02□□□□□ -0.33
RNF17-204ENST00000339524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.96□□□□□ -0.33
RNF17-204ENST00000339524 U3KPZ7 1027 aaPredicted RBP12.72□□□□□ -0.37
RNF17-204ENST00000339524 SLC4A2P04920 1241 aa12.66□□□□□ -0.38
RNF17-204ENST00000339524 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
RNF17-204ENST00000339524 CAPN15O75808 1086 aa12.45□□□□□ -0.42
RNF17-204ENST00000339524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
RNF17-204ENST00000339524 HNRNPUL2Q1KMD3 747 aaKnown RBP12.41□□□□□ -0.42
RNF17-204ENST00000339524 APLP2Q06481 763 aa12.39□□□□□ -0.43
RNF17-204ENST00000339524 DSG3P32926 999 aa12.39□□□□□ -0.43
RNF17-204ENST00000339524 SLC4A1APQ9BWU0 796 aaKnown RBP12.38□□□□□ -0.43
RNF17-204ENST00000339524 SAMD1Q6SPF0 538 aaPredicted RBP12.34□□□□□ -0.43
RNF17-204ENST00000339524 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
RNF17-204ENST00000339524 MYCNP04198 464 aaPredicted RBP12.29□□□□□ -0.44
RNF17-204ENST00000339524 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
RNF17-204ENST00000339524 FOXD4L1Q9NU39 408 aa12.21□□□□□ -0.46
RNF17-204ENST00000339524 ABCB7O75027 752 aa12.16□□□□□ -0.46
RNF17-204ENST00000339524 ZBTB22O15209 634 aa12.05□□□□□ -0.48
RNF17-204ENST00000339524 POLA2Q14181 598 aa11.98□□□□□ -0.49
RNF17-204ENST00000339524 ATF5Q9Y2D1 282 aaPredicted RBP11.97□□□□□ -0.49
RNF17-204ENST00000339524 ATXN8OSP0DMR3 200 aa11.86□□□□□ -0.51
RNF17-204ENST00000339524 RBM42Q9BTD8 480 aaKnown RBP11.83□□□□□ -0.52
RNF17-204ENST00000339524 ZBTB12Q9Y330 459 aaPredicted RBP11.78□□□□□ -0.52
RNF17-204ENST00000339524 POTEHQ6S545 545 aa11.7□□□□□ -0.54
RNF17-204ENST00000339524 OSCARQ8IYS5 282 aa11.59□□□□□ -0.55
RNF17-204ENST00000339524 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
RNF17-204ENST00000339524 AKT1S1Q96B36 256 aa11.58□□□□□ -0.56
RNF17-204ENST00000339524 FBLN2P98095 1184 aa11.51□□□□□ -0.57
RNF17-204ENST00000339524 CHRDL2Q6WN34 429 aa11.51□□□□□ -0.57
RNF17-204ENST00000339524 REM2Q8IYK8 340 aaPredicted RBP11.45□□□□□ -0.58
RNF17-204ENST00000339524 MKRN4PQ13434 485 aaPredicted RBP11.44□□□□□ -0.58
RNF17-204ENST00000339524 EHMT2Q96KQ7 1210 aa11.43□□□□□ -0.58
RNF17-204ENST00000339524 SPDYE2BA6NHP3 402 aa11.42□□□□□ -0.58
RNF17-204ENST00000339524 SPDYE6P0CI01 402 aa11.42□□□□□ -0.58
RNF17-204ENST00000339524 SPDYE2Q495Y8 402 aa11.42□□□□□ -0.58
RNF17-204ENST00000339524 PITPNM1O00562 1244 aa11.32□□□□□ -0.6
RNF17-204ENST00000339524 SSUH2Q9Y2M2 353 aa11.28□□□□□ -0.6
RNF17-204ENST00000339524 ZNF692Q9BU19 519 aaPredicted RBP11.27□□□□□ -0.61
RNF17-204ENST00000339524 PIP4P2Q8N4L2 257 aa11.27□□□□□ -0.61
RNF17-204ENST00000339524 FXR2P51116 673 aaKnown RBP eCLIP11.23□□□□□ -0.61
RNF17-204ENST00000339524 SPDYE1Q8NFV5 336 aaPredicted RBP11.19□□□□□ -0.62
RNF17-204ENST00000339524 CLEC11AQ9Y240 323 aa11.12□□□□□ -0.63
RNF17-204ENST00000339524 PABPN1Q86U42 306 aaKnown RBP eCLIP11.11□□□□□ -0.63
RNF17-204ENST00000339524 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
RNF17-204ENST00000339524 SP7Q8TDD2 431 aaPredicted RBP11.02□□□□□ -0.65
RNF17-204ENST00000339524 HAX1O00165 279 aa11□□□□□ -0.65
RNF17-204ENST00000339524 PRR29P0C7W0 189 aa10.97□□□□□ -0.65
RNF17-204ENST00000339524 SPDYE4A6NLX3 237 aa10.94□□□□□ -0.66
RNF17-204ENST00000339524 CHADLQ6NUI6 762 aa10.9□□□□□ -0.66
RNF17-204ENST00000339524 EVX2Q03828 476 aa10.89□□□□□ -0.67
RNF17-204ENST00000339524 C19orf67A6NJJ6 358 aa10.86□□□□□ -0.67
RNF17-204ENST00000339524 STAG3Q9UJ98 1225 aa10.85□□□□□ -0.67
RNF17-204ENST00000339524 FARP1Q9Y4F1 1045 aaPredicted RBP10.78□□□□□ -0.68
RNF17-204ENST00000339524 CREBZFQ9NS37 354 aa10.74□□□□□ -0.69
RNF17-204ENST00000339524 PROM2Q8N271 834 aa10.74□□□□□ -0.69
RNF17-204ENST00000339524 CD44P16070 742 aaKnown RBP10.68□□□□□ -0.7
RNF17-204ENST00000339524 GABBR2O75899 941 aa10.66□□□□□ -0.7
RNF17-204ENST00000339524 MNX1P50219 401 aaPredicted RBP10.58□□□□□ -0.72
RNF17-204ENST00000339524 CLCN6P51797 869 aa10.58□□□□□ -0.72
RNF17-204ENST00000339524 ZNF579Q8NAF0 562 aaKnown RBP10.55□□□□□ -0.72
RNF17-204ENST00000339524 NPM1P06748 294 aaKnown RBP eCLIP10.54□□□□□ -0.72
RNF17-204ENST00000339524 ZRANB1Q9UGI0 708 aa10.54□□□□□ -0.72
RNF17-204ENST00000339524 PAK3O75914 559 aaPredicted RBP10.48□□□□□ -0.73
RNF17-204ENST00000339524 FKBP8Q14318 412 aa10.48□□□□□ -0.73
RNF17-204ENST00000339524 POTEIP0CG38 1075 aa10.44□□□□□ -0.74
RNF17-204ENST00000339524 MIER1Q8N108 512 aa10.41□□□□□ -0.74
RNF17-204ENST00000339524 PLEKHG5O94827 1062 aa10.41□□□□□ -0.74
RNF17-204ENST00000339524 PHF12Q96QT6 1004 aa10.41□□□□□ -0.74
RNF17-204ENST00000339524 GALR2O43603 387 aaPredicted RBP10.38□□□□□ -0.75
RNF17-204ENST00000339524 DCBLD2Q96PD2 775 aa10.38□□□□□ -0.75
RNF17-204ENST00000339524 PLCD3Q8N3E9 789 aa10.34□□□□□ -0.75
RNF17-204ENST00000339524 LHX8Q68G74 356 aa10.33□□□□□ -0.76
RNF17-204ENST00000339524 TSPYL2Q9H2G4 693 aaPredicted RBP10.33□□□□□ -0.76
RNF17-204ENST00000339524 CCDC61Q9Y6R9 512 aa10.31□□□□□ -0.76
RNF17-204ENST00000339524 ZBTB47Q9UFB7 747 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms