RNA–Protein interactions for RNA: ENST00000479743.1

RPS3AP43-201, Transcript of ribosomal protein S3a pseudogene 43, humanhuman

BASIC

Gene RPS3AP43, Length 781 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP43-201ENST00000479743 AEBP2Q6ZN18 517 aaPredicted RBP26.2■■□□□ 1.78
RPS3AP43-201ENST00000479743 CHIC1Q5VXU3 224 aa25.35■■□□□ 1.65
RPS3AP43-201ENST00000479743 SENP3Q9H4L4 574 aaPredicted RBP22.29■■□□□ 1.16
RPS3AP43-201ENST00000479743 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
RPS3AP43-201ENST00000479743 FOXD1Q16676 465 aa20.71■□□□□ 0.91
RPS3AP43-201ENST00000479743 PLPPR3Q6T4P5 718 aa20.47■□□□□ 0.87
RPS3AP43-201ENST00000479743 PPP6R1Q9UPN7 881 aa19.73■□□□□ 0.75
RPS3AP43-201ENST00000479743 ADRA2BP18089 450 aa19.68■□□□□ 0.74
RPS3AP43-201ENST00000479743 PIAS4Q8N2W9 510 aaPredicted RBP19.45■□□□□ 0.7
RPS3AP43-201ENST00000479743 MSH5O43196 834 aa19.21■□□□□ 0.67
RPS3AP43-201ENST00000479743 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
RPS3AP43-201ENST00000479743 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
RPS3AP43-201ENST00000479743 POTEDQ86YR6 584 aa17.95■□□□□ 0.46
RPS3AP43-201ENST00000479743 MAPK8IP2Q13387 824 aaPredicted RBP17.94■□□□□ 0.46
RPS3AP43-201ENST00000479743 DMRT2Q9Y5R5 561 aa17.75■□□□□ 0.43
RPS3AP43-201ENST00000479743 CNKSR2Q8WXI2 1034 aa17.56■□□□□ 0.4
RPS3AP43-201ENST00000479743 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
RPS3AP43-201ENST00000479743 HOXD11P31277 338 aaPredicted RBP17.3■□□□□ 0.36
RPS3AP43-201ENST00000479743 RNF216Q9NWF9 866 aaPredicted RBP17.28■□□□□ 0.36
RPS3AP43-201ENST00000479743 KCNA4P22459 653 aa17.27■□□□□ 0.36
RPS3AP43-201ENST00000479743 NPM3O75607 178 aaKnown RBP17.19■□□□□ 0.34
RPS3AP43-201ENST00000479743 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
RPS3AP43-201ENST00000479743 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
RPS3AP43-201ENST00000479743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.45■□□□□ 0.22
RPS3AP43-201ENST00000479743 RNF39Q9H2S5 420 aa16.44■□□□□ 0.22
RPS3AP43-201ENST00000479743 SLC4A1APQ9BWU0 796 aaKnown RBP16.39■□□□□ 0.21
RPS3AP43-201ENST00000479743 SLC4A2P04920 1241 aa16.3■□□□□ 0.2
RPS3AP43-201ENST00000479743 C1QBPQ07021 282 aaKnown RBP16.24■□□□□ 0.19
RPS3AP43-201ENST00000479743 CACNB1Q02641 598 aaPredicted RBP16.18■□□□□ 0.18
RPS3AP43-201ENST00000479743 U3KPZ7 1027 aaPredicted RBP16.16■□□□□ 0.18
RPS3AP43-201ENST00000479743 FOXD4L1Q9NU39 408 aa15.98■□□□□ 0.15
RPS3AP43-201ENST00000479743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.89■□□□□ 0.13
RPS3AP43-201ENST00000479743 MYCNP04198 464 aaPredicted RBP15.89■□□□□ 0.13
RPS3AP43-201ENST00000479743 HNRNPUL2Q1KMD3 747 aaKnown RBP15.89■□□□□ 0.13
RPS3AP43-201ENST00000479743 ZBTB22O15209 634 aa15.88■□□□□ 0.13
RPS3AP43-201ENST00000479743 SAMD1Q6SPF0 538 aaPredicted RBP15.81■□□□□ 0.12
RPS3AP43-201ENST00000479743 APLP2Q06481 763 aa15.78■□□□□ 0.12
RPS3AP43-201ENST00000479743 SPINK5Q9NQ38 1064 aaPredicted RBP15.78■□□□□ 0.12
RPS3AP43-201ENST00000479743 CAPN15O75808 1086 aa15.72■□□□□ 0.11
RPS3AP43-201ENST00000479743 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
RPS3AP43-201ENST00000479743 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
RPS3AP43-201ENST00000479743 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.08
RPS3AP43-201ENST00000479743 EHMT2Q96KQ7 1210 aa15.58■□□□□ 0.08
RPS3AP43-201ENST00000479743 DSG3P32926 999 aa15.54■□□□□ 0.08
RPS3AP43-201ENST00000479743 ATF5Q9Y2D1 282 aaPredicted RBP15.48■□□□□ 0.07
RPS3AP43-201ENST00000479743 ATXN8OSP0DMR3 200 aa15.47■□□□□ 0.07
RPS3AP43-201ENST00000479743 ABCB7O75027 752 aa15.39■□□□□ 0.05
RPS3AP43-201ENST00000479743 POLA2Q14181 598 aa15.3■□□□□ 0.04
RPS3AP43-201ENST00000479743 ZBTB12Q9Y330 459 aaPredicted RBP15.02■□□□□ -0
RPS3AP43-201ENST00000479743 FBLN2P98095 1184 aa14.85□□□□□ -0.03
RPS3AP43-201ENST00000479743 RBM42Q9BTD8 480 aaKnown RBP14.82□□□□□ -0.04
RPS3AP43-201ENST00000479743 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
RPS3AP43-201ENST00000479743 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
RPS3AP43-201ENST00000479743 SPDYE2BA6NHP3 402 aa14.6□□□□□ -0.07
RPS3AP43-201ENST00000479743 SPDYE6P0CI01 402 aa14.6□□□□□ -0.07
RPS3AP43-201ENST00000479743 SPDYE2Q495Y8 402 aa14.6□□□□□ -0.07
RPS3AP43-201ENST00000479743 AKT1S1Q96B36 256 aa14.59□□□□□ -0.07
RPS3AP43-201ENST00000479743 ZNF692Q9BU19 519 aaPredicted RBP14.5□□□□□ -0.09
RPS3AP43-201ENST00000479743 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
RPS3AP43-201ENST00000479743 REM2Q8IYK8 340 aaPredicted RBP14.44□□□□□ -0.1
RPS3AP43-201ENST00000479743 SPDYE4A6NLX3 237 aa14.33□□□□□ -0.12
RPS3AP43-201ENST00000479743 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
RPS3AP43-201ENST00000479743 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
RPS3AP43-201ENST00000479743 PITPNM1O00562 1244 aa14.26□□□□□ -0.13
RPS3AP43-201ENST00000479743 SPDYE1Q8NFV5 336 aaPredicted RBP14.23□□□□□ -0.13
RPS3AP43-201ENST00000479743 POTEHQ6S545 545 aa14.15□□□□□ -0.14
RPS3AP43-201ENST00000479743 CLEC11AQ9Y240 323 aa14.15□□□□□ -0.14
RPS3AP43-201ENST00000479743 PROM2Q8N271 834 aa14.09□□□□□ -0.15
RPS3AP43-201ENST00000479743 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.16
RPS3AP43-201ENST00000479743 FKBP8Q14318 412 aa14.08□□□□□ -0.16
RPS3AP43-201ENST00000479743 PIP4P2Q8N4L2 257 aa14.06□□□□□ -0.16
RPS3AP43-201ENST00000479743 STAG3Q9UJ98 1225 aa14.03□□□□□ -0.16
RPS3AP43-201ENST00000479743 PRR29P0C7W0 189 aa14.01□□□□□ -0.17
RPS3AP43-201ENST00000479743 PRKAR2AP13861 404 aaKnown RBP13.91□□□□□ -0.18
RPS3AP43-201ENST00000479743 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
RPS3AP43-201ENST00000479743 CREBZFQ9NS37 354 aa13.77□□□□□ -0.21
RPS3AP43-201ENST00000479743 FARP1Q9Y4F1 1045 aaPredicted RBP13.71□□□□□ -0.21
RPS3AP43-201ENST00000479743 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
RPS3AP43-201ENST00000479743 HAX1O00165 279 aa13.68□□□□□ -0.22
RPS3AP43-201ENST00000479743 MIER1Q8N108 512 aa13.63□□□□□ -0.23
RPS3AP43-201ENST00000479743 MNX1P50219 401 aaPredicted RBP13.62□□□□□ -0.23
RPS3AP43-201ENST00000479743 C19orf67A6NJJ6 358 aa13.6□□□□□ -0.23
RPS3AP43-201ENST00000479743 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
RPS3AP43-201ENST00000479743 PLCD3Q8N3E9 789 aa13.56□□□□□ -0.24
RPS3AP43-201ENST00000479743 EVX2Q03828 476 aa13.55□□□□□ -0.24
RPS3AP43-201ENST00000479743 NPM1P06748 294 aaKnown RBP eCLIP13.54□□□□□ -0.24
RPS3AP43-201ENST00000479743 SP7Q8TDD2 431 aaPredicted RBP13.49□□□□□ -0.25
RPS3AP43-201ENST00000479743 CD44P16070 742 aaKnown RBP13.48□□□□□ -0.25
RPS3AP43-201ENST00000479743 VASPP50552 380 aaPredicted RBP13.48□□□□□ -0.25
RPS3AP43-201ENST00000479743 ZBTB47Q9UFB7 747 aaPredicted RBP13.45□□□□□ -0.26
RPS3AP43-201ENST00000479743 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
RPS3AP43-201ENST00000479743 PAK3O75914 559 aaPredicted RBP13.37□□□□□ -0.27
RPS3AP43-201ENST00000479743 ZNF579Q8NAF0 562 aaKnown RBP13.32□□□□□ -0.28
RPS3AP43-201ENST00000479743 NUBP1P53384 320 aa13.31□□□□□ -0.28
RPS3AP43-201ENST00000479743 KLHL34Q8N239 644 aa13.31□□□□□ -0.28
RPS3AP43-201ENST00000479743 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
RPS3AP43-201ENST00000479743 IFNLR1Q8IU57 520 aaPredicted RBP13.29□□□□□ -0.28
RPS3AP43-201ENST00000479743 TSPYL2Q9H2G4 693 aaPredicted RBP13.29□□□□□ -0.28
RPS3AP43-201ENST00000479743 GABBR2O75899 941 aa13.28□□□□□ -0.28
RPS3AP43-201ENST00000479743 CLCN6P51797 869 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms