RNA–Protein interactions for RNA: ENST00000410983.1

RNU6-564P-201, Transcript of RNA, U6 small nuclear 564, pseudogene, humanhuman

BASIC

Gene RNU6-564P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-564P-201ENST00000410983 CHIC1Q5VXU3 224 aa23.89■■□□□ 1.41
RNU6-564P-201ENST00000410983 AEBP2Q6ZN18 517 aaPredicted RBP23.79■■□□□ 1.4
RNU6-564P-201ENST00000410983 PHF23Q9BUL5 403 aaPredicted RBP21.07■□□□□ 0.96
RNU6-564P-201ENST00000410983 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
RNU6-564P-201ENST00000410983 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
RNU6-564P-201ENST00000410983 FOXD1Q16676 465 aa18.57■□□□□ 0.56
RNU6-564P-201ENST00000410983 ADRA2BP18089 450 aa18.42■□□□□ 0.54
RNU6-564P-201ENST00000410983 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
RNU6-564P-201ENST00000410983 KCNA4P22459 653 aa17.76■□□□□ 0.43
RNU6-564P-201ENST00000410983 PIAS4Q8N2W9 510 aaPredicted RBP17.68■□□□□ 0.42
RNU6-564P-201ENST00000410983 PPP4R3CPQ6ZMV5 832 aa17.45■□□□□ 0.38
RNU6-564P-201ENST00000410983 EHMT2Q96KQ7 1210 aa17.32■□□□□ 0.36
RNU6-564P-201ENST00000410983 NCBP3Q53F19 620 aaKnown RBP17.19■□□□□ 0.34
RNU6-564P-201ENST00000410983 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
RNU6-564P-201ENST00000410983 NPM3O75607 178 aaKnown RBP16.92■□□□□ 0.3
RNU6-564P-201ENST00000410983 MSH5O43196 834 aa16.89■□□□□ 0.29
RNU6-564P-201ENST00000410983 SCAF1Q9H7N4 1312 aaKnown RBP16.88■□□□□ 0.29
RNU6-564P-201ENST00000410983 CNKSR2Q8WXI2 1034 aa16.82■□□□□ 0.28
RNU6-564P-201ENST00000410983 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
RNU6-564P-201ENST00000410983 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
RNU6-564P-201ENST00000410983 ZBTB22O15209 634 aa16.34■□□□□ 0.21
RNU6-564P-201ENST00000410983 RNF216Q9NWF9 866 aaPredicted RBP16.32■□□□□ 0.2
RNU6-564P-201ENST00000410983 DNAJC5BQ9UF47 199 aa16.31■□□□□ 0.2
RNU6-564P-201ENST00000410983 FOXD4L1Q9NU39 408 aa16.18■□□□□ 0.18
RNU6-564P-201ENST00000410983 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
RNU6-564P-201ENST00000410983 HOXD11P31277 338 aaPredicted RBP16.07■□□□□ 0.16
RNU6-564P-201ENST00000410983 SLC4A2P04920 1241 aa15.8■□□□□ 0.12
RNU6-564P-201ENST00000410983 MYCNP04198 464 aaPredicted RBP15.63■□□□□ 0.09
RNU6-564P-201ENST00000410983 ATXN8OSP0DMR3 200 aa15.56■□□□□ 0.08
RNU6-564P-201ENST00000410983 DCAF8L1A6NGE4 600 aa15.45■□□□□ 0.06
RNU6-564P-201ENST00000410983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
RNU6-564P-201ENST00000410983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.2■□□□□ 0.02
RNU6-564P-201ENST00000410983 HNRNPUL2Q1KMD3 747 aaKnown RBP15.2■□□□□ 0.02
RNU6-564P-201ENST00000410983 FKBP8Q14318 412 aa15.18■□□□□ 0.02
RNU6-564P-201ENST00000410983 SAMD1Q6SPF0 538 aaPredicted RBP15.17■□□□□ 0.02
RNU6-564P-201ENST00000410983 ATF5Q9Y2D1 282 aaPredicted RBP15.15■□□□□ 0.02
RNU6-564P-201ENST00000410983 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
RNU6-564P-201ENST00000410983 AMER1Q5JTC6 1135 aaPredicted RBP14.98□□□□□ -0.01
RNU6-564P-201ENST00000410983 RTN4Q9NQC3 1192 aaKnown RBP14.94□□□□□ -0.02
RNU6-564P-201ENST00000410983 APLP2Q06481 763 aa14.9□□□□□ -0.02
RNU6-564P-201ENST00000410983 ZNF219Q9P2Y4 722 aaPredicted RBP14.85□□□□□ -0.03
RNU6-564P-201ENST00000410983 SLC24A1O60721 1099 aa14.58□□□□□ -0.08
RNU6-564P-201ENST00000410983 TRHP20396 242 aaPredicted RBP14.55□□□□□ -0.08
RNU6-564P-201ENST00000410983 SPDYE4A6NLX3 237 aa14.53□□□□□ -0.08
RNU6-564P-201ENST00000410983 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
RNU6-564P-201ENST00000410983 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
RNU6-564P-201ENST00000410983 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
RNU6-564P-201ENST00000410983 FBLN2P98095 1184 aa14.5□□□□□ -0.09
RNU6-564P-201ENST00000410983 FBXO3Q9UK99 471 aa14.47□□□□□ -0.09
RNU6-564P-201ENST00000410983 CAPN15O75808 1086 aa14.46□□□□□ -0.09
RNU6-564P-201ENST00000410983 POLA2Q14181 598 aa14.46□□□□□ -0.09
RNU6-564P-201ENST00000410983 C1QBPQ07021 282 aaKnown RBP14.39□□□□□ -0.11
RNU6-564P-201ENST00000410983 PROM2Q8N271 834 aa14.35□□□□□ -0.11
RNU6-564P-201ENST00000410983 POTEDQ86YR6 584 aa14.31□□□□□ -0.12
RNU6-564P-201ENST00000410983 ZBTB12Q9Y330 459 aaPredicted RBP14.26□□□□□ -0.13
RNU6-564P-201ENST00000410983 ABCB7O75027 752 aa14.23□□□□□ -0.13
RNU6-564P-201ENST00000410983 VASPP50552 380 aaPredicted RBP14.22□□□□□ -0.13
RNU6-564P-201ENST00000410983 IFNLR1Q8IU57 520 aaPredicted RBP14.09□□□□□ -0.15
RNU6-564P-201ENST00000410983 DSG3P32926 999 aa14.04□□□□□ -0.16
RNU6-564P-201ENST00000410983 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
RNU6-564P-201ENST00000410983 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
RNU6-564P-201ENST00000410983 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
RNU6-564P-201ENST00000410983 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
RNU6-564P-201ENST00000410983 OSCARQ8IYS5 282 aa13.92□□□□□ -0.18
RNU6-564P-201ENST00000410983 STAG3Q9UJ98 1225 aa13.89□□□□□ -0.19
RNU6-564P-201ENST00000410983 SSUH2Q9Y2M2 353 aa13.88□□□□□ -0.19
RNU6-564P-201ENST00000410983 DCAF8L2P0C7V8 631 aa13.87□□□□□ -0.19
RNU6-564P-201ENST00000410983 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
RNU6-564P-201ENST00000410983 PKD2Q13563 968 aa13.86□□□□□ -0.19
RNU6-564P-201ENST00000410983 PABPN1Q86U42 306 aaKnown RBP eCLIP13.82□□□□□ -0.2
RNU6-564P-201ENST00000410983 SPOCK2Q92563 424 aa13.82□□□□□ -0.2
RNU6-564P-201ENST00000410983 PLCB2Q00722 1185 aa13.81□□□□□ -0.2
RNU6-564P-201ENST00000410983 PLCD3Q8N3E9 789 aa13.78□□□□□ -0.2
RNU6-564P-201ENST00000410983 MIER1Q8N108 512 aa13.73□□□□□ -0.21
RNU6-564P-201ENST00000410983 CACNB1Q02641 598 aaPredicted RBP13.69□□□□□ -0.22
RNU6-564P-201ENST00000410983 ECM2O94769 699 aaPredicted RBP13.68□□□□□ -0.22
RNU6-564P-201ENST00000410983 HAP1P54257 671 aaPredicted RBP13.65□□□□□ -0.22
RNU6-564P-201ENST00000410983 PLEKHG5O94827 1062 aa13.63□□□□□ -0.23
RNU6-564P-201ENST00000410983 ZBTB47Q9UFB7 747 aaPredicted RBP13.59□□□□□ -0.23
RNU6-564P-201ENST00000410983 BBXQ8WY36 941 aaPredicted RBP13.54□□□□□ -0.24
RNU6-564P-201ENST00000410983 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.54□□□□□ -0.24
RNU6-564P-201ENST00000410983 RGL2O15211 777 aa13.51□□□□□ -0.25
RNU6-564P-201ENST00000410983 CIZ1Q9ULV3 898 aaPredicted RBP13.51□□□□□ -0.25
RNU6-564P-201ENST00000410983 NPM1P06748 294 aaKnown RBP eCLIP13.48□□□□□ -0.25
RNU6-564P-201ENST00000410983 VSIG10Q8N0Z9 540 aa13.45□□□□□ -0.26
RNU6-564P-201ENST00000410983 PAXIP1Q6ZW49 1069 aaPredicted RBP13.42□□□□□ -0.26
RNU6-564P-201ENST00000410983 TRIM41Q8WV44 630 aa13.4□□□□□ -0.26
RNU6-564P-201ENST00000410983 CFAP44Q96MT7 982 aa13.4□□□□□ -0.26
RNU6-564P-201ENST00000410983 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
RNU6-564P-201ENST00000410983 SPDYE1Q8NFV5 336 aaPredicted RBP13.37□□□□□ -0.27
RNU6-564P-201ENST00000410983 AKT1S1Q96B36 256 aa13.35□□□□□ -0.27
RNU6-564P-201ENST00000410983 GSE1Q14687 1217 aa13.34□□□□□ -0.27
RNU6-564P-201ENST00000410983 CHGAP10645 457 aaKnown RBP13.33□□□□□ -0.28
RNU6-564P-201ENST00000410983 SPRYD3Q8NCJ5 442 aa13.33□□□□□ -0.28
RNU6-564P-201ENST00000410983 BCANQ96GW7 911 aa13.31□□□□□ -0.28
RNU6-564P-201ENST00000410983 CLEC11AQ9Y240 323 aa13.3□□□□□ -0.28
RNU6-564P-201ENST00000410983 NUBP1P53384 320 aa13.28□□□□□ -0.28
RNU6-564P-201ENST00000410983 PRR29P0C7W0 189 aa13.27□□□□□ -0.29
RNU6-564P-201ENST00000410983 DCAF8Q5TAQ9 597 aa13.25□□□□□ -0.29
RNU6-564P-201ENST00000410983 KDM2AQ9Y2K7 1162 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms