RNA–Protein interactions for RNA: ENST00000505363.2

PCNAP1-201, Transcript of proliferating cell nuclear antigen pseudogene 1, humanhuman

BASIC

Gene PCNAP1, Length 709 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP1-201ENST00000505363 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
PCNAP1-201ENST00000505363 AEBP2Q6ZN18 517 aaPredicted RBP21.62■■□□□ 1.05
PCNAP1-201ENST00000505363 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
PCNAP1-201ENST00000505363 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
PCNAP1-201ENST00000505363 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
PCNAP1-201ENST00000505363 FOXD1Q16676 465 aa16.84■□□□□ 0.29
PCNAP1-201ENST00000505363 ADRA2BP18089 450 aa16.82■□□□□ 0.28
PCNAP1-201ENST00000505363 PPP6R1Q9UPN7 881 aa16.74■□□□□ 0.27
PCNAP1-201ENST00000505363 KCNA4P22459 653 aa16.37■□□□□ 0.21
PCNAP1-201ENST00000505363 PIAS4Q8N2W9 510 aaPredicted RBP16.05■□□□□ 0.16
PCNAP1-201ENST00000505363 EHMT2Q96KQ7 1210 aa16.03■□□□□ 0.16
PCNAP1-201ENST00000505363 PPP4R3CPQ6ZMV5 832 aa15.97■□□□□ 0.15
PCNAP1-201ENST00000505363 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.12
PCNAP1-201ENST00000505363 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
PCNAP1-201ENST00000505363 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
PCNAP1-201ENST00000505363 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.08
PCNAP1-201ENST00000505363 CNKSR2Q8WXI2 1034 aa15.38■□□□□ 0.05
PCNAP1-201ENST00000505363 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
PCNAP1-201ENST00000505363 MSH5O43196 834 aa15.29■□□□□ 0.04
PCNAP1-201ENST00000505363 POTEDQ86YR6 584 aa15.11■□□□□ 0.01
PCNAP1-201ENST00000505363 ZBTB22O15209 634 aa15.07■□□□□ 0
PCNAP1-201ENST00000505363 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
PCNAP1-201ENST00000505363 MAPK8IP2Q13387 824 aaPredicted RBP14.98□□□□□ -0.01
PCNAP1-201ENST00000505363 RNF216Q9NWF9 866 aaPredicted RBP14.92□□□□□ -0.02
PCNAP1-201ENST00000505363 FOXD4L1Q9NU39 408 aa14.9□□□□□ -0.02
PCNAP1-201ENST00000505363 DMRT2Q9Y5R5 561 aa14.7□□□□□ -0.06
PCNAP1-201ENST00000505363 HOXD11P31277 338 aaPredicted RBP14.68□□□□□ -0.06
PCNAP1-201ENST00000505363 SLC4A2P04920 1241 aa14.48□□□□□ -0.09
PCNAP1-201ENST00000505363 ATXN8OSP0DMR3 200 aa14.35□□□□□ -0.11
PCNAP1-201ENST00000505363 MYCNP04198 464 aaPredicted RBP14.34□□□□□ -0.11
PCNAP1-201ENST00000505363 AMER1Q5JTC6 1135 aaPredicted RBP14.05□□□□□ -0.16
PCNAP1-201ENST00000505363 FKBP8Q14318 412 aa14.02□□□□□ -0.17
PCNAP1-201ENST00000505363 RTN4Q9NQC3 1192 aaKnown RBP13.99□□□□□ -0.17
PCNAP1-201ENST00000505363 DCAF8L1A6NGE4 600 aa13.95□□□□□ -0.18
PCNAP1-201ENST00000505363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCNAP1-201ENST00000505363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.92□□□□□ -0.18
PCNAP1-201ENST00000505363 HNRNPUL2Q1KMD3 747 aaKnown RBP13.92□□□□□ -0.18
PCNAP1-201ENST00000505363 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
PCNAP1-201ENST00000505363 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
PCNAP1-201ENST00000505363 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
PCNAP1-201ENST00000505363 SLC24A1O60721 1099 aa13.8□□□□□ -0.2
PCNAP1-201ENST00000505363 APLP2Q06481 763 aa13.61□□□□□ -0.23
PCNAP1-201ENST00000505363 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
PCNAP1-201ENST00000505363 FBXO3Q9UK99 471 aa13.37□□□□□ -0.27
PCNAP1-201ENST00000505363 SPDYE4A6NLX3 237 aa13.36□□□□□ -0.27
PCNAP1-201ENST00000505363 MKRN4PQ13434 485 aaPredicted RBP13.31□□□□□ -0.28
PCNAP1-201ENST00000505363 PROM2Q8N271 834 aa13.29□□□□□ -0.28
PCNAP1-201ENST00000505363 FBLN2P98095 1184 aa13.27□□□□□ -0.29
PCNAP1-201ENST00000505363 TRHP20396 242 aaPredicted RBP13.2□□□□□ -0.3
PCNAP1-201ENST00000505363 SPINK5Q9NQ38 1064 aaPredicted RBP13.19□□□□□ -0.3
PCNAP1-201ENST00000505363 POLA2Q14181 598 aa13.17□□□□□ -0.3
PCNAP1-201ENST00000505363 RNF39Q9H2S5 420 aa13.16□□□□□ -0.3
PCNAP1-201ENST00000505363 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
PCNAP1-201ENST00000505363 CAPN15O75808 1086 aa13.1□□□□□ -0.31
PCNAP1-201ENST00000505363 C1QBPQ07021 282 aaKnown RBP13.06□□□□□ -0.32
PCNAP1-201ENST00000505363 ZBTB12Q9Y330 459 aaPredicted RBP13.06□□□□□ -0.32
PCNAP1-201ENST00000505363 IFNLR1Q8IU57 520 aaPredicted RBP13.01□□□□□ -0.33
PCNAP1-201ENST00000505363 PLCB2Q00722 1185 aa12.93□□□□□ -0.34
PCNAP1-201ENST00000505363 CACNB1Q02641 598 aaPredicted RBP12.93□□□□□ -0.34
PCNAP1-201ENST00000505363 ABCB7O75027 752 aa12.9□□□□□ -0.34
PCNAP1-201ENST00000505363 PKD2Q13563 968 aa12.86□□□□□ -0.35
PCNAP1-201ENST00000505363 DCAF8L2P0C7V8 631 aa12.8□□□□□ -0.36
PCNAP1-201ENST00000505363 ZNF692Q9BU19 519 aaPredicted RBP12.78□□□□□ -0.36
PCNAP1-201ENST00000505363 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
PCNAP1-201ENST00000505363 SPOCK2Q92563 424 aa12.76□□□□□ -0.37
PCNAP1-201ENST00000505363 SPDYE2BA6NHP3 402 aa12.75□□□□□ -0.37
PCNAP1-201ENST00000505363 SPDYE6P0CI01 402 aa12.75□□□□□ -0.37
PCNAP1-201ENST00000505363 DSG3P32926 999 aa12.75□□□□□ -0.37
PCNAP1-201ENST00000505363 SPDYE2Q495Y8 402 aa12.75□□□□□ -0.37
PCNAP1-201ENST00000505363 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
PCNAP1-201ENST00000505363 SSUH2Q9Y2M2 353 aa12.73□□□□□ -0.37
PCNAP1-201ENST00000505363 HAP1P54257 671 aaPredicted RBP12.7□□□□□ -0.38
PCNAP1-201ENST00000505363 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
PCNAP1-201ENST00000505363 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
PCNAP1-201ENST00000505363 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
PCNAP1-201ENST00000505363 PABPN1Q86U42 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
PCNAP1-201ENST00000505363 VSIG10Q8N0Z9 540 aa12.59□□□□□ -0.39
PCNAP1-201ENST00000505363 BBXQ8WY36 941 aaPredicted RBP12.59□□□□□ -0.39
PCNAP1-201ENST00000505363 MIER1Q8N108 512 aa12.57□□□□□ -0.4
PCNAP1-201ENST00000505363 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.57□□□□□ -0.4
PCNAP1-201ENST00000505363 BCANQ96GW7 911 aa12.51□□□□□ -0.41
PCNAP1-201ENST00000505363 NPM1P06748 294 aaKnown RBP eCLIP12.5□□□□□ -0.41
PCNAP1-201ENST00000505363 ZBTB47Q9UFB7 747 aaPredicted RBP12.5□□□□□ -0.41
PCNAP1-201ENST00000505363 RGL2O15211 777 aa12.49□□□□□ -0.41
PCNAP1-201ENST00000505363 PLEKHG5O94827 1062 aa12.49□□□□□ -0.41
PCNAP1-201ENST00000505363 PAXIP1Q6ZW49 1069 aaPredicted RBP12.44□□□□□ -0.42
PCNAP1-201ENST00000505363 CIZ1Q9ULV3 898 aaPredicted RBP12.41□□□□□ -0.42
PCNAP1-201ENST00000505363 CFAP44Q96MT7 982 aa12.4□□□□□ -0.42
PCNAP1-201ENST00000505363 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
PCNAP1-201ENST00000505363 SPRYD3Q8NCJ5 442 aa12.37□□□□□ -0.43
PCNAP1-201ENST00000505363 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
PCNAP1-201ENST00000505363 CHGAP10645 457 aaKnown RBP12.32□□□□□ -0.44
PCNAP1-201ENST00000505363 TAOK2Q9UL54 1235 aa12.29□□□□□ -0.44
PCNAP1-201ENST00000505363 GSE1Q14687 1217 aa12.28□□□□□ -0.44
PCNAP1-201ENST00000505363 HS6ST3Q8IZP7 471 aa12.25□□□□□ -0.45
PCNAP1-201ENST00000505363 TSHZ2Q9NRE2 1034 aa12.25□□□□□ -0.45
PCNAP1-201ENST00000505363 DNAJC5Q9H3Z4 198 aa12.22□□□□□ -0.45
PCNAP1-201ENST00000505363 NUBP1P53384 320 aa12.21□□□□□ -0.45
PCNAP1-201ENST00000505363 PRKCSHP14314 528 aaPredicted RBP12.2□□□□□ -0.46
PCNAP1-201ENST00000505363 SPDYE1Q8NFV5 336 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 291.2 ms