RNA–Protein interactions for RNA: ENST00000408580.1

RNU6ATAC40P-201, Transcript of RNA, U6atac small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6ATAC40P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC40P-201ENST00000408580 NISCHQ9Y2I1 1504 aa5.72□□□□□ -1.49
RNU6ATAC40P-201ENST00000408580 PELP1Q8IZL8 1130 aaKnown RBP5.28□□□□□ -1.56
RNU6ATAC40P-201ENST00000408580 HRCP23327 699 aa5.23□□□□□ -1.57
RNU6ATAC40P-201ENST00000408580 MYT1Q01538 1121 aa5.15□□□□□ -1.59
RNU6ATAC40P-201ENST00000408580 DCAF1Q9Y4B6 1507 aa5.05□□□□□ -1.6
RNU6ATAC40P-201ENST00000408580 CCDC180Q9P1Z9 1646 aa5.04□□□□□ -1.6
RNU6ATAC40P-201ENST00000408580 MYO15BQ96JP2 1530 aa5.02□□□□□ -1.61
RNU6ATAC40P-201ENST00000408580 ZEB1P37275 1124 aaPredicted RBP4.99□□□□□ -1.61
RNU6ATAC40P-201ENST00000408580 PCGF6Q9BYE7 350 aa4.99□□□□□ -1.61
RNU6ATAC40P-201ENST00000408580 PPARGC1BQ86YN6 1023 aaKnown RBP4.98□□□□□ -1.61
RNU6ATAC40P-201ENST00000408580 CHIC1Q5VXU3 224 aa4.95□□□□□ -1.62
RNU6ATAC40P-201ENST00000408580 SCAF1Q9H7N4 1312 aaKnown RBP4.93□□□□□ -1.62
RNU6ATAC40P-201ENST00000408580 TRIM26Q12899 539 aaPredicted RBP4.92□□□□□ -1.62
RNU6ATAC40P-201ENST00000408580 SUPT5HO00267 1087 aaKnown RBP4.91□□□□□ -1.62
RNU6ATAC40P-201ENST00000408580 ZCCHC6Q5VYS8 1495 aaKnown RBP4.89□□□□□ -1.63
RNU6ATAC40P-201ENST00000408580 SHROOM4Q9ULL8 1493 aa4.89□□□□□ -1.63
RNU6ATAC40P-201ENST00000408580 TTBK1Q5TCY1 1321 aaPredicted RBP4.88□□□□□ -1.63
RNU6ATAC40P-201ENST00000408580 ACIN1Q9UKV3 1341 aaKnown RBP4.85□□□□□ -1.63
RNU6ATAC40P-201ENST00000408580 CENPBP07199 599 aaPredicted RBP4.81□□□□□ -1.64
RNU6ATAC40P-201ENST00000408580 NEUROD1Q13562 356 aa4.77□□□□□ -1.65
RNU6ATAC40P-201ENST00000408580 GTF3C3Q9Y5Q9 886 aa4.76□□□□□ -1.65
RNU6ATAC40P-201ENST00000408580 LOC105371045A0A1W2PR82 267 aa4.75□□□□□ -1.65
RNU6ATAC40P-201ENST00000408580 DIEXFQ68CQ4 756 aaKnown RBP4.7□□□□□ -1.66
RNU6ATAC40P-201ENST00000408580 CLSPNQ9HAW4 1339 aa4.7□□□□□ -1.66
RNU6ATAC40P-201ENST00000408580 ABCC9O60706 1549 aa4.68□□□□□ -1.66
RNU6ATAC40P-201ENST00000408580 TRIM41Q8WV44 630 aa4.66□□□□□ -1.66
RNU6ATAC40P-201ENST00000408580 CCER1Q8TC90 406 aaPredicted RBP4.64□□□□□ -1.67
RNU6ATAC40P-201ENST00000408580 RB1CC1Q8TDY2 1594 aa4.64□□□□□ -1.67
RNU6ATAC40P-201ENST00000408580 ZNF316A6NFI3 1004 aaPredicted RBP4.63□□□□□ -1.67
RNU6ATAC40P-201ENST00000408580 ANP32EQ9BTT0 268 aa4.63□□□□□ -1.67
RNU6ATAC40P-201ENST00000408580 BCL11AQ9H165 835 aa4.62□□□□□ -1.67
RNU6ATAC40P-201ENST00000408580 WRNQ14191 1432 aaPredicted RBP eCLIP4.61□□□□□ -1.67
RNU6ATAC40P-201ENST00000408580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.59□□□□□ -1.67
RNU6ATAC40P-201ENST00000408580 RSF1Q96T23 1441 aaPredicted RBP4.57□□□□□ -1.68
RNU6ATAC40P-201ENST00000408580 FAM9AQ8IZU1 332 aaPredicted RBP4.56□□□□□ -1.68
RNU6ATAC40P-201ENST00000408580 MIER1Q8N108 512 aa4.54□□□□□ -1.68
RNU6ATAC40P-201ENST00000408580 SUPT16HQ9Y5B9 1047 aaKnown RBP4.54□□□□□ -1.68
RNU6ATAC40P-201ENST00000408580 EIF4G1Q04637 1599 aaKnown RBP4.53□□□□□ -1.68
RNU6ATAC40P-201ENST00000408580 YTHDC1Q96MU7 727 aaKnown RBP4.53□□□□□ -1.68
RNU6ATAC40P-201ENST00000408580 TSHZ2Q9NRE2 1034 aa4.53□□□□□ -1.68
RNU6ATAC40P-201ENST00000408580 ERICH6Q7L0X2 663 aa4.52□□□□□ -1.69
RNU6ATAC40P-201ENST00000408580 CSRNP3Q8WYN3 585 aa4.51□□□□□ -1.69
RNU6ATAC40P-201ENST00000408580 DCAF8L2P0C7V8 631 aa4.5□□□□□ -1.69
RNU6ATAC40P-201ENST00000408580 MYT1LQ9UL68 1186 aa4.5□□□□□ -1.69
RNU6ATAC40P-201ENST00000408580 TNIKQ9UKE5 1360 aa4.5□□□□□ -1.69
RNU6ATAC40P-201ENST00000408580 EEA1Q15075 1411 aa4.49□□□□□ -1.69
RNU6ATAC40P-201ENST00000408580 BAZ1AQ9NRL2 1556 aaPredicted RBP4.48□□□□□ -1.69
RNU6ATAC40P-201ENST00000408580 CEP162Q5TB80 1403 aa4.48□□□□□ -1.69
RNU6ATAC40P-201ENST00000408580 PRKCSHP14314 528 aaPredicted RBP4.48□□□□□ -1.69
RNU6ATAC40P-201ENST00000408580 SCRIBQ14160 1630 aa4.46□□□□□ -1.69
RNU6ATAC40P-201ENST00000408580 WIZO95785 1651 aa4.45□□□□□ -1.7
RNU6ATAC40P-201ENST00000408580 KIF21BO75037 1637 aa4.44□□□□□ -1.7
RNU6ATAC40P-201ENST00000408580 GOLGA3Q08378 1498 aa4.43□□□□□ -1.7
RNU6ATAC40P-201ENST00000408580 APLP2Q06481 763 aa4.43□□□□□ -1.7
RNU6ATAC40P-201ENST00000408580 NACADO15069 1562 aa4.43□□□□□ -1.7
RNU6ATAC40P-201ENST00000408580 FANCIQ9NVI1 1328 aa4.43□□□□□ -1.7
RNU6ATAC40P-201ENST00000408580 MROH2BQ7Z745 1585 aa4.42□□□□□ -1.7
RNU6ATAC40P-201ENST00000408580 RBM19Q9Y4C8 960 aaKnown RBP4.42□□□□□ -1.7
RNU6ATAC40P-201ENST00000408580 ABCC8Q09428 1581 aa4.4□□□□□ -1.7
RNU6ATAC40P-201ENST00000408580 NEFLP07196 543 aa4.4□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 ERICH6BQ5W0A0 696 aa4.4□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 EHMT2Q96KQ7 1210 aa4.4□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 CUX2O14529 1486 aa4.4□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 BAZ1BQ9UIG0 1483 aaKnown RBP4.4□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 TOP2AP11388 1531 aaKnown RBP4.4□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 DHX57Q6P158 1386 aaKnown RBP4.4□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 VPS8Q8N3P4 1428 aa4.39□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 CCDC88BA6NC98 1476 aa4.39□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 CECR2Q9BXF3 1484 aa4.38□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 CEP164Q9UPV0 1460 aa4.38□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 FKBP8Q14318 412 aa4.38□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 SMARCA2P51531 1590 aa4.37□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 MSH5O43196 834 aa4.37□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 SOGA1O94964 1423 aa4.37□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 CCER2I3L3R5 266 aa4.36□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 HNRNPUL2Q1KMD3 747 aaKnown RBP4.36□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 CLIP1P30622 1438 aa4.36□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 UBTFP17480 764 aaKnown RBP4.35□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 RRBP1Q9P2E9 1410 aaKnown RBP4.35□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 DEKP35659 375 aaKnown RBP4.34□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 BCANQ96GW7 911 aa4.34□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 CDK11AQ9UQ88 783 aaPredicted RBP4.34□□□□□ -1.71
RNU6ATAC40P-201ENST00000408580 SMARCA4P51532 1647 aa4.33□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 SYNJ1O43426 1573 aa4.33□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 RUSC2Q8N2Y8 1516 aa4.33□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 TIMELESSQ9UNS1 1208 aa4.32□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 ERICH3Q5RHP9 1530 aa4.31□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 MAPKBP1O60336 1514 aa4.31□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 PPP1R15AO75807 674 aaPredicted RBP4.3□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 UBE2Q2Q8WVN8 375 aa4.3□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 WDR97A6NE52 1622 aa4.29□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 ANP32CO43423 234 aa4.29□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 PPP4R2Q9NY27 417 aa4.29□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 NOP58Q9Y2X3 529 aaKnown RBP4.29□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 MAP3K1Q13233 1512 aa4.29□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 KCNH8Q96L42 1107 aa4.28□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 ANO8Q9HCE9 1232 aaPredicted RBP4.28□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 ARAP1Q96P48 1450 aa4.28□□□□□ -1.72
RNU6ATAC40P-201ENST00000408580 ITGAEP38570 1179 aa4.27□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 BIVM-ERCC5R4GMW8 1640 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms