RNA–Protein interactions for RNA: ENST00000531034.1

PTP4A1P6-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 6, humanhuman

BASIC

Gene PTP4A1P6, Length 478 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P6-201ENST00000531034 AEBP2Q6ZN18 517 aaPredicted RBP20.25■□□□□ 0.83
PTP4A1P6-201ENST00000531034 CHIC1Q5VXU3 224 aa19.32■□□□□ 0.68
PTP4A1P6-201ENST00000531034 SENP3Q9H4L4 574 aaPredicted RBP17.61■□□□□ 0.41
PTP4A1P6-201ENST00000531034 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
PTP4A1P6-201ENST00000531034 FOXD1Q16676 465 aa16.2■□□□□ 0.18
PTP4A1P6-201ENST00000531034 PLPPR3Q6T4P5 718 aa15.51■□□□□ 0.07
PTP4A1P6-201ENST00000531034 MSH5O43196 834 aa15.48■□□□□ 0.07
PTP4A1P6-201ENST00000531034 PIAS4Q8N2W9 510 aaPredicted RBP15.22■□□□□ 0.03
PTP4A1P6-201ENST00000531034 POTEDQ86YR6 584 aa15.04■□□□□ -0
PTP4A1P6-201ENST00000531034 PPP6R1Q9UPN7 881 aa14.95□□□□□ -0.02
PTP4A1P6-201ENST00000531034 ADRA2BP18089 450 aa14.93□□□□□ -0.02
PTP4A1P6-201ENST00000531034 SCAF1Q9H7N4 1312 aaKnown RBP14.05□□□□□ -0.16
PTP4A1P6-201ENST00000531034 DMRT2Q9Y5R5 561 aa13.87□□□□□ -0.19
PTP4A1P6-201ENST00000531034 MAPK8IP2Q13387 824 aaPredicted RBP13.69□□□□□ -0.22
PTP4A1P6-201ENST00000531034 PPP4R3CPQ6ZMV5 832 aa13.46□□□□□ -0.25
PTP4A1P6-201ENST00000531034 CNKSR2Q8WXI2 1034 aa13.34□□□□□ -0.27
PTP4A1P6-201ENST00000531034 HOXD11P31277 338 aaPredicted RBP13.33□□□□□ -0.28
PTP4A1P6-201ENST00000531034 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
PTP4A1P6-201ENST00000531034 RNF216Q9NWF9 866 aaPredicted RBP13.25□□□□□ -0.29
PTP4A1P6-201ENST00000531034 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
PTP4A1P6-201ENST00000531034 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
PTP4A1P6-201ENST00000531034 DNAJC5BQ9UF47 199 aa13.1□□□□□ -0.31
PTP4A1P6-201ENST00000531034 RNF39Q9H2S5 420 aa13.05□□□□□ -0.32
PTP4A1P6-201ENST00000531034 C1QBPQ07021 282 aaKnown RBP12.99□□□□□ -0.33
PTP4A1P6-201ENST00000531034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.72□□□□□ -0.37
PTP4A1P6-201ENST00000531034 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
PTP4A1P6-201ENST00000531034 APLP2Q06481 763 aa12.37□□□□□ -0.43
PTP4A1P6-201ENST00000531034 U3KPZ7 1027 aaPredicted RBP12.32□□□□□ -0.44
PTP4A1P6-201ENST00000531034 KCNA4P22459 653 aa12.28□□□□□ -0.44
PTP4A1P6-201ENST00000531034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.27□□□□□ -0.45
PTP4A1P6-201ENST00000531034 HNRNPUL2Q1KMD3 747 aaKnown RBP12.27□□□□□ -0.45
PTP4A1P6-201ENST00000531034 CAPN15O75808 1086 aa12.23□□□□□ -0.45
PTP4A1P6-201ENST00000531034 DSG3P32926 999 aa12.15□□□□□ -0.46
PTP4A1P6-201ENST00000531034 ZNF219Q9P2Y4 722 aaPredicted RBP12.14□□□□□ -0.47
PTP4A1P6-201ENST00000531034 SAMD1Q6SPF0 538 aaPredicted RBP12.11□□□□□ -0.47
PTP4A1P6-201ENST00000531034 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
PTP4A1P6-201ENST00000531034 SLC4A2P04920 1241 aa12.07□□□□□ -0.48
PTP4A1P6-201ENST00000531034 TRHP20396 242 aaPredicted RBP11.97□□□□□ -0.49
PTP4A1P6-201ENST00000531034 MYCNP04198 464 aaPredicted RBP11.89□□□□□ -0.51
PTP4A1P6-201ENST00000531034 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
PTP4A1P6-201ENST00000531034 POTEHQ6S545 545 aa11.83□□□□□ -0.52
PTP4A1P6-201ENST00000531034 ABCB7O75027 752 aa11.82□□□□□ -0.52
PTP4A1P6-201ENST00000531034 SLC4A1APQ9BWU0 796 aaKnown RBP11.7□□□□□ -0.54
PTP4A1P6-201ENST00000531034 FOXD4L1Q9NU39 408 aa11.67□□□□□ -0.54
PTP4A1P6-201ENST00000531034 ZBTB12Q9Y330 459 aaPredicted RBP11.67□□□□□ -0.54
PTP4A1P6-201ENST00000531034 POLA2Q14181 598 aa11.64□□□□□ -0.55
PTP4A1P6-201ENST00000531034 AKT1S1Q96B36 256 aa11.45□□□□□ -0.58
PTP4A1P6-201ENST00000531034 ATXN8OSP0DMR3 200 aa11.44□□□□□ -0.58
PTP4A1P6-201ENST00000531034 CHRDL2Q6WN34 429 aa11.44□□□□□ -0.58
PTP4A1P6-201ENST00000531034 ATF5Q9Y2D1 282 aaPredicted RBP11.32□□□□□ -0.6
PTP4A1P6-201ENST00000531034 FBLN2P98095 1184 aa11.24□□□□□ -0.61
PTP4A1P6-201ENST00000531034 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
PTP4A1P6-201ENST00000531034 REM2Q8IYK8 340 aaPredicted RBP11.22□□□□□ -0.61
PTP4A1P6-201ENST00000531034 ZBTB22O15209 634 aa11.19□□□□□ -0.62
PTP4A1P6-201ENST00000531034 SPDYE2BA6NHP3 402 aa11.17□□□□□ -0.62
PTP4A1P6-201ENST00000531034 SPDYE6P0CI01 402 aa11.17□□□□□ -0.62
PTP4A1P6-201ENST00000531034 SPDYE2Q495Y8 402 aa11.17□□□□□ -0.62
PTP4A1P6-201ENST00000531034 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
PTP4A1P6-201ENST00000531034 PITPNM1O00562 1244 aa11.07□□□□□ -0.64
PTP4A1P6-201ENST00000531034 SP7Q8TDD2 431 aaPredicted RBP11.07□□□□□ -0.64
PTP4A1P6-201ENST00000531034 FXR2P51116 673 aaKnown RBP eCLIP11.05□□□□□ -0.64
PTP4A1P6-201ENST00000531034 SPDYE1Q8NFV5 336 aaPredicted RBP11.01□□□□□ -0.65
PTP4A1P6-201ENST00000531034 HAX1O00165 279 aa10.96□□□□□ -0.65
PTP4A1P6-201ENST00000531034 ZNF692Q9BU19 519 aaPredicted RBP10.95□□□□□ -0.66
PTP4A1P6-201ENST00000531034 SSUH2Q9Y2M2 353 aa10.93□□□□□ -0.66
PTP4A1P6-201ENST00000531034 CLEC11AQ9Y240 323 aa10.87□□□□□ -0.67
PTP4A1P6-201ENST00000531034 MKRN4PQ13434 485 aaPredicted RBP10.85□□□□□ -0.67
PTP4A1P6-201ENST00000531034 PRKAR2AP13861 404 aaKnown RBP10.82□□□□□ -0.68
PTP4A1P6-201ENST00000531034 PRR29P0C7W0 189 aa10.75□□□□□ -0.69
PTP4A1P6-201ENST00000531034 PABPN1Q86U42 306 aaKnown RBP eCLIP10.73□□□□□ -0.69
PTP4A1P6-201ENST00000531034 C19orf67A6NJJ6 358 aa10.7□□□□□ -0.7
PTP4A1P6-201ENST00000531034 CLCN6P51797 869 aa10.69□□□□□ -0.7
PTP4A1P6-201ENST00000531034 CSRNP3Q8WYN3 585 aa10.66□□□□□ -0.7
PTP4A1P6-201ENST00000531034 STAG3Q9UJ98 1225 aa10.64□□□□□ -0.71
PTP4A1P6-201ENST00000531034 EVX2Q03828 476 aa10.58□□□□□ -0.72
PTP4A1P6-201ENST00000531034 CHADLQ6NUI6 762 aa10.54□□□□□ -0.72
PTP4A1P6-201ENST00000531034 FARP1Q9Y4F1 1045 aaPredicted RBP10.53□□□□□ -0.72
PTP4A1P6-201ENST00000531034 GABBR2O75899 941 aa10.52□□□□□ -0.73
PTP4A1P6-201ENST00000531034 CD44P16070 742 aaKnown RBP10.5□□□□□ -0.73
PTP4A1P6-201ENST00000531034 EHMT2Q96KQ7 1210 aa10.46□□□□□ -0.73
PTP4A1P6-201ENST00000531034 SPDYE4A6NLX3 237 aa10.44□□□□□ -0.74
PTP4A1P6-201ENST00000531034 PAK3O75914 559 aaPredicted RBP10.41□□□□□ -0.74
PTP4A1P6-201ENST00000531034 NPM1P06748 294 aaKnown RBP eCLIP10.37□□□□□ -0.75
PTP4A1P6-201ENST00000531034 LHX8Q68G74 356 aa10.37□□□□□ -0.75
PTP4A1P6-201ENST00000531034 ZNF579Q8NAF0 562 aaKnown RBP10.37□□□□□ -0.75
PTP4A1P6-201ENST00000531034 DCBLD2Q96PD2 775 aa10.34□□□□□ -0.75
PTP4A1P6-201ENST00000531034 CREBZFQ9NS37 354 aa10.33□□□□□ -0.76
PTP4A1P6-201ENST00000531034 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
PTP4A1P6-201ENST00000531034 PLEKHG5O94827 1062 aa10.24□□□□□ -0.77
PTP4A1P6-201ENST00000531034 POTEIP0CG38 1075 aa10.17□□□□□ -0.78
PTP4A1P6-201ENST00000531034 PROM2Q8N271 834 aa10.17□□□□□ -0.78
PTP4A1P6-201ENST00000531034 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
PTP4A1P6-201ENST00000531034 GALR2O43603 387 aaPredicted RBP10.11□□□□□ -0.79
PTP4A1P6-201ENST00000531034 ZBTB47Q9UFB7 747 aaPredicted RBP10.07□□□□□ -0.8
PTP4A1P6-201ENST00000531034 PHF12Q96QT6 1004 aa10.05□□□□□ -0.8
PTP4A1P6-201ENST00000531034 SLC39A7Q92504 469 aa10.03□□□□□ -0.8
PTP4A1P6-201ENST00000531034 C7P10643 843 aa10.02□□□□□ -0.81
PTP4A1P6-201ENST00000531034 ASTLQ6HA08 431 aaPredicted RBP10.01□□□□□ -0.81
PTP4A1P6-201ENST00000531034 MAMSTRQ6ZN01 415 aa10.01□□□□□ -0.81
PTP4A1P6-201ENST00000531034 MIER1Q8N108 512 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms